chr1.CM0163.50.nc (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr1.CM0163.50.nc T290656_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.680 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0163.50.nc Myb 14 61
chr1.CM0163.50.nc Myb 67 112

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA18G50881 Glycine max GLYMA18G50881 I 0.770
mgf002201m Mimulus guttatus mgf002201m I 0.744
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I 0.743
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I 0.743
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I 0.737
MDP0000286143 Malus domestica MDP0000286143 I 0.736
Lus10005079.g Linum usitatissimum Lus10005079.g I 0.736
TCM_018971 Theobroma cacao TCM_018971 I 0.735
Pm015392 Prunus mume Pm015392 I 0.733
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I 0.727
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I 0.722
cassava9891.m1 Manihot esculenta cassava9891.m1 I 0.716
Gorai.001G090100 Gossypium raimondii Gorai.001G090100 I 0.716
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I 0.714
Lus10034372.g Linum usitatissimum Lus10034372.g I 0.709
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I 0.708
ATMYB121 Vitis vinifera VIT_14s0083g01060 I 0.708
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I 0.705
Cucsa.238540 Cucumis sativus Cucsa.238540 I 0.702
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.698
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.698
GLYMA18G50891 Glycine max GLYMA18G50891 I 0.698
Cla016762 Citrullus lanatus Cla016762 I 0.698
ORUFI03G03040 Oryza rufipogon ORUFI03G03040 I 0.696
ORGLA03G0030900 Oryza glaberrima ORGLA03G0030900 I 0.696
OS03G0142600 Oryza sativa OS03G0142600 I 0.696
OB03G13340 Oryza brachyantha OB03G13340 I 0.696
Traes_4DL_14C563681 Triticum aestivum Traes_4DL_14C563681 N 0.696
Si037281m.g Setaria italica Si037281m.g I 0.696
Pavir.Ia04415 Panicum virgatum Pavir.Ia04415 I 0.696
Sb01g047450 Sorghum bicolor Sb01g047450 I 0.696
F775_32337 Aegilops tauschii F775_32337 N 0.696
GRMZM2G054111 Zea mays GRMZM2G054111 I 0.696
BGIOSGA011479 Oryza indica BGIOSGA011479 I 0.696
MLOC_9927 Hordeum vulgare MLOC_9927 I 0.696
MTR_1g073170 Medicago truncatula MTR_1g073170 I 0.694
Pavir.Ib00221 Panicum virgatum Pavir.Ib00221 I 0.692
Ca_07872 Cicer arietinum Ca_07872 I 0.689
SapurV1A.0323s0160 Salix purpurea SapurV1A.0323s0160 I 0.689
GLYMA20G20980 Glycine max GLYMA20G20980 I 0.686
Bra025410 Brassica rapa Bra025410 I 0.683
Lus10023711.g Linum usitatissimum Lus10023711.g I 0.683
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I 0.683
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I 0.682
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I 0.681
ATMYB121 Arabidopsis thaliana AT3G30210 D 0.680
Bra020744 Brassica rapa Bra020744 I 0.680
Bo7g088650 Brassica oleracea Bo7g088650 I 0.680
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I 0.680
Carubv10018530m.g Capsella rubella Carubv10018530m.g I 0.680
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I 0.680
Bo9g009020 Brassica oleracea Bo9g009020 I 0.680
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I 0.679
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I 0.678
mgf004640m Mimulus guttatus mgf004640m I 0.678
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I 0.674
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I 0.674
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I 0.674
MTR_1g045610 Medicago truncatula MTR_1g045610 I 0.674
GLYMA08G27660 Glycine max GLYMA08G27660 I 0.673
GSMUA_Achr1G03450_001 Musa acuminata GSMUA_Achr1G03450_001 I 0.673
Bra015029 Brassica rapa Bra015029 I 0.673
Bo7g033260 Brassica oleracea Bo7g033260 I 0.673
GSMUA_Achr11G02410_001 Musa acuminata GSMUA_Achr11G02410_001 I 0.671
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I 0.669
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I 0.669
GLYMA17G17560 Glycine max GLYMA17G17560 I 0.669
Bo3g083130 Brassica oleracea Bo3g083130 I 0.669
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I 0.669
Bo1g098860 Brassica oleracea Bo1g098860 I 0.669
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I 0.669
MYB305 Arabidopsis thaliana AT3G24310 I 0.669
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I 0.669
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I 0.669
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I 0.669
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I 0.669
Bra001941 Brassica rapa Bra001941 I 0.669
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I 0.669
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I 0.669
Pm009050 Prunus mume Pm009050 I 0.669
Bra028369 Brassica rapa Bra028369 I 0.669
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I 0.669
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I 0.669
GLYMA10G26681 Glycine max GLYMA10G26681 I 0.669
Carubv10014367m.g Capsella rubella Carubv10014367m.g I 0.669
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I 0.669
GRMZM2G040924 Zea mays GRMZM2G040924 I 0.668
POPTR_0004s11460 Populus trichocarpa POPTR_0004s11460 I 0.666
GLYMA10G33450 Glycine max GLYMA10G33450 I 0.665
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.665
AMTR_s00039p00172240 Amborella trichopoda AMTR_s00039p00172240 I 0.664
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I 0.663