CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr2.LjT13M01.180.nd
(
Lotus japonicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
chr2.LjT13M01.180.nd
T290690_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.849
0.903
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.769
0.796
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.723
0.774
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr2.LjT13M01.180.nd
Myb
60
106
RGPWSPEEDTVLSQLVAQFGARNWSMIARGIPGRSGKSCRLRWCNQL
chr2.LjT13M01.180.nd
Myb
112
157
RKPFTEEEDRLIISAHAIHGNRWAAIARLLPGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Lotus japonicus
TFs
255 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK07741.1
Cannabis sativa
PK07741.1
D
0.849
MDP0000284922
Malus domestica
MDP0000284922
I
0.828
Pm018862
Prunus mume
Pm018862
I
0.826
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.816
Si001686m.g
Setaria italica
Si001686m.g
I
0.816
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.812
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.812
MDP0000807341
Malus domestica
MDP0000807341
I
0.811
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.806
TCM_042629
Theobroma cacao
TCM_042629
I
0.806
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
0.804
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.798
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.794
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.794
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.793
Thhalv10021963m.g
Eutrema salsugineum
Thhalv10021963m.g
I
0.790
mgf018580m
Mimulus guttatus
mgf018580m
I
0.785
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.785
MDP0000478512
Malus domestica
MDP0000478512
I
0.784
GSMUA_Achr5G28780_001
Musa acuminata
GSMUA_Achr5G28780_001
I
0.783
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.783
Sb03g039950
Sorghum bicolor
Sb03g039950
I
0.783
Solyc09g011780.2
Solanum lycopersicum
Solyc09g011780.2
I
0.783
GLYMA02G42030
Glycine max
GLYMA02G42030
I
0.782
Cagra.2515s0014
Capsella grandiflora
Cagra.2515s0014
I
0.781
Carubv10013882m.g
Capsella rubella
Carubv10013882m.g
I
0.781
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
0.779
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.777
SapurV1A.0709s0060
Salix purpurea
SapurV1A.0709s0060
I
0.777
Eucgr.J00250
Eucalyptus grandis
Eucgr.J00250
I
0.775
GSMUA_Achr9G03720_001
Musa acuminata
GSMUA_Achr9G03720_001
I
0.775
GRMZM2G169316
Zea mays
GRMZM2G169316
I
0.774
Pavir.Ea03398
Panicum virgatum
Pavir.Ea03398
I
0.774
Pavir.J13677
Panicum virgatum
Pavir.J13677
I
0.774
gene20888-v1.0-hybrid
Fragaria vesca
gene20888-v1.0-hybrid
I
0.772
MYB1
Arabidopsis thaliana
AT3G09230
D
0.769
Lus10028250.g
Linum usitatissimum
Lus10028250.g
I
0.766
Lus10040239.g
Linum usitatissimum
Lus10040239.g
I
0.766
GSMUA_Achr6G33470_001
Musa acuminata
GSMUA_Achr6G33470_001
I
0.766
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.763
MLOC_10322
Hordeum vulgare
MLOC_10322
I
0.760
AtMYB1
Arabidopsis lyrata
scaffold_301043.1
I
0.760
MDP0000203733
Malus domestica
MDP0000203733
I
0.757
Carubv10017397m.g
Capsella rubella
Carubv10017397m.g
I
0.757
Cagra.0003s0013
Capsella grandiflora
Cagra.0003s0013
I
0.757
MDP0000319124
Malus domestica
MDP0000319124
I
0.757
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.754
Bo3g062160
Brassica oleracea
Bo3g062160
I
0.747
VIT_08s0007g01540
Vitis vinifera
VIT_08s0007g01540
I
0.743
Ciclev10012003m.g
Citrus clementina
Ciclev10012003m.g
I
0.741
orange1.1g017566m.g
Citrus sinensis
orange1.1g017566m.g
I
0.741
SapurV1A.0262s0270
Salix purpurea
SapurV1A.0262s0270
I
0.740
Solyc05g052850.2
Solanum lycopersicum
Solyc05g052850.2
I
0.740
Bostr.22252s0145
Boechera stricta
Bostr.22252s0145
I
0.736
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.736
gene18756-v1.0-hybrid
Fragaria vesca
gene18756-v1.0-hybrid
I
0.734
PK12959.1
Cannabis sativa
PK12959.1
I
0.734
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.733
mgf015566m
Mimulus guttatus
mgf015566m
I
0.733
Cla018417
Citrullus lanatus
Cla018417
I
0.733
Cucsa.066910
Cucumis sativus
Cucsa.066910
I
0.733
27798.m000612
Ricinus communis
27798.m000612
I
0.733
Bra007186
Brassica rapa
Bra007186
I
0.732
Thhalv10010431m.g
Eutrema salsugineum
Thhalv10010431m.g
I
0.732
Bostr.20505s0177
Boechera stricta
Bostr.20505s0177
I
0.732
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.731
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.728
Pm002576
Prunus mume
Pm002576
I
0.727
TCM_021796
Theobroma cacao
TCM_021796
I
0.727
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.727
MYB109
Arabidopsis lyrata
fgenesh2_kg.5__1999__AT3G55730.1
I
0.727
PK16550.1
Cannabis sativa
PK16550.1
I
0.725
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.724
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.723
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.723
Si017917m.g
Setaria italica
Si017917m.g
I
0.723
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.723
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.723
OS02G0187700
Oryza sativa
OS02G0187700
D
0.723
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.723
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.723
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.723
Bo8g090160
Brassica oleracea
Bo8g090160
I
0.723
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.723
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.723
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.723
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.723
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.723
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.723
Eucgr.K03010
Eucalyptus grandis
Eucgr.K03010
I
0.721
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.721
OMERI01G34370
Oryza meridionalis
OMERI01G34370
I
0.720
VIT_13s0019g03200
Vitis vinifera
VIT_13s0019g03200
I
0.719
SELMODRAFT_113522
Selaginella moellendorffii
SELMODRAFT_113522
I
0.719
SELMODRAFT_77255
Selaginella moellendorffii
SELMODRAFT_77255
I
0.719
BGIOSGA000485
Oryza indica
BGIOSGA000485
I
0.717
OBART01G37390
Oryza barthii
OBART01G37390
I
0.717
ONIVA01G42300
Oryza nivara
ONIVA01G42300
I
0.717
ORUFI01G40770
Oryza rufipogon
ORUFI01G40770
I
0.717
OPUNC01G36300
Oryza punctata
OPUNC01G36300
I
0.717
OS01G0850400
Oryza sativa
OS01G0850400
I
0.717
OLONG_001357
Oryza longistaminata
OLONG_001357
I
0.717
ORGLA01G0312200
Oryza glaberrima
ORGLA01G0312200
I
0.717
OGLUM01G41330
Oryza glumaepatula
OGLUM01G41330
I
0.717
PGSC0003DMG400027190
Solanum tuberosum
PGSC0003DMG400027190
I
0.716
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.713
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
0.710
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.709
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.708
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
0.707
GRMZM2G078820
Zea mays
GRMZM2G078820
I
0.705
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.704
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.704
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
0.703
Bra001323
Brassica rapa
Bra001323
I
0.702
Cucsa.244650
Cucumis sativus
Cucsa.244650
I
0.702
Sb10g024950
Sorghum bicolor
Sb10g024950
I
0.701
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.701
GRMZM5G803308
Zea mays
GRMZM5G803308
I
0.701
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.701
Si006938m.g
Setaria italica
Si006938m.g
I
0.701
Pavir.Db00693
Panicum virgatum
Pavir.Db00693
I
0.701
Pavir.Da00404
Panicum virgatum
Pavir.Da00404
I
0.701
Bra005006
Brassica rapa
Bra005006
I
0.700
Thhalv10016794m.g
Eutrema salsugineum
Thhalv10016794m.g
I
0.699
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
0.699
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
0.699
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
0.697
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.696
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.696
Si032789m.g
Setaria italica
Si032789m.g
I
0.696
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.696
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.695
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.695
Bo4g025810
Brassica oleracea
Bo4g025810
I
0.695
Ciclev10001803m.g
Citrus clementina
Ciclev10001803m.g
I
0.693
Pm022705
Prunus mume
Pm022705
I
0.693
orange1.1g020106m.g
Citrus sinensis
orange1.1g020106m.g
I
0.693
mgf020432m
Mimulus guttatus
mgf020432m
I
0.693
GLYMA06G12691
Glycine max
GLYMA06G12691
I
0.693
MTR_3g089045
Medicago truncatula
MTR_3g089045
I
0.693
MDP0000852158
Malus domestica
MDP0000852158
I
0.693
SapurV1A.0261s0130
Salix purpurea
SapurV1A.0261s0130
I
0.693
GLYMA04G42110
Glycine max
GLYMA04G42110
I
0.693
PRUPE_ppa016398mg
Prunus persica
PRUPE_ppa016398mg
I
0.693
TCM_035359
Theobroma cacao
TCM_035359
I
0.693
SapurV1A.2350s0020
Salix purpurea
SapurV1A.2350s0020
I
0.693
MDP0000291518
Malus domestica
MDP0000291518
I
0.693
POPTR_0005s20870
Populus trichocarpa
POPTR_0005s20870
I
0.693
evm.TU.supercontig_26.97
Carica papaya
evm.TU.supercontig_26.97
I
0.693
Gorai.009G251700
Gossypium raimondii
Gorai.009G251700
I
0.693
gene01013-v1.0-hybrid
Fragaria vesca
gene01013-v1.0-hybrid
I
0.693
Gorai.013G106600
Gossypium raimondii
Gorai.013G106600
I
0.693
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.692
MYB109
Arabidopsis thaliana
AT3G55730
I
0.692
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.692
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.692
OBART09G00310
Oryza barthii
OBART09G00310
I
0.692
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.692
OB09G10200
Oryza brachyantha
OB09G10200
I
0.692
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.692
OS09G0106700
Oryza sativa
OS09G0106700
I
0.692
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.692
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.692
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.692
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.692
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.692
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.692
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.691
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.691
29814.m000736
Ricinus communis
29814.m000736
I
0.691
Ca_12468
Cicer arietinum
Ca_12468
I
0.689
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
0.689
TRIUR3_08319
Triticum urartu
TRIUR3_08319
I
0.689
OB01G46120
Oryza brachyantha
OB01G46120
I
0.687
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
0.686
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.686
Cla014084
Citrullus lanatus
Cla014084
I
0.686
Cucsa.077160
Cucumis sativus
Cucsa.077160
I
0.686
Traes_7DL_1FA87027B
Triticum aestivum
Traes_7DL_1FA87027B
I
0.686
MLOC_63964
Hordeum vulgare
MLOC_63964
I
0.686
MDP0000298689
Malus domestica
MDP0000298689
I
0.686
TRIUR3_25447
Triticum urartu
TRIUR3_25447
I
0.686
MLOC_64963
Hordeum vulgare
MLOC_64963
I
0.686
Ciclev10032317m.g
Citrus clementina
Ciclev10032317m.g
I
0.685
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.685
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I
0.685
orange1.1g046570m.g
Citrus sinensis
orange1.1g046570m.g
I
0.685
29801.m003096
Ricinus communis
29801.m003096
I
0.685
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.685
evm.TU.supercontig_19.155
Carica papaya
evm.TU.supercontig_19.155
I
0.684
Bra034057
Brassica rapa
Bra034057
I
0.684
Bo7g117880
Brassica oleracea
Bo7g117880
I
0.684
Cla004431
Citrullus lanatus
Cla004431
I
0.684
OS06G0637500
Oryza sativa
OS06G0637500
I
0.682
Ca_03919
Cicer arietinum
Ca_03919
I
0.682
LPERR06G18380
Leersia perrieri
LPERR06G18380
I
0.682
OPUNC06G19910
Oryza punctata
OPUNC06G19910
I
0.682
OGLUM06G23260
Oryza glumaepatula
OGLUM06G23260
I
0.682
ONIVA06G26080
Oryza nivara
ONIVA06G26080
I
0.682
OMERI06G22090
Oryza meridionalis
OMERI06G22090
I
0.682
ORUFI06G23790
Oryza rufipogon
ORUFI06G23790
I
0.682
BGIOSGA020819
Oryza indica
BGIOSGA020819
I
0.682
ORGLA06G0184100
Oryza glaberrima
ORGLA06G0184100
I
0.682
evm.TU.supercontig_56.79
Carica papaya
evm.TU.supercontig_56.79
I
0.680
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.679
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.679
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
0.679
LPERR01G32110
Leersia perrieri
LPERR01G32110
I
0.677
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.677
Cla022889
Citrullus lanatus
Cla022889
I
0.676
PK29071.1
Cannabis sativa
PK29071.1
I
0.676
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.676
PRUPE_ppa017892mg
Prunus persica
PRUPE_ppa017892mg
I
0.675
Pm018951
Prunus mume
Pm018951
I
0.675
mgf025567m
Mimulus guttatus
mgf025567m
I
0.674
TCM_042474
Theobroma cacao
TCM_042474
I
0.674
Bostr.23794s0078
Boechera stricta
Bostr.23794s0078
I
0.674
PK01153.1
Cannabis sativa
PK01153.1
I
0.674
MTR_6g015455
Medicago truncatula
MTR_6g015455
I
0.673
TCM_033907
Theobroma cacao
TCM_033907
I
0.672
Pm021211
Prunus mume
Pm021211
I
0.672
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
0.672
Sb0088s002210
Sorghum bicolor
Sb0088s002210
N
0.672
PRUPE_ppa023154mg
Prunus persica
PRUPE_ppa023154mg
I
0.672
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.672
mgf006151m
Mimulus guttatus
mgf006151m
I
0.672
Bo1g144680
Brassica oleracea
Bo1g144680
I
0.672
Eucgr.F04277
Eucalyptus grandis
Eucgr.F04277
I
0.670
estExt_fgenesh4_pg.C_10375
Volvox carteri
estExt_fgenesh4_pg.C_10375
I
0.670
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.670
ATMYB54
Arabidopsis thaliana
AT1G73410
I
0.669
Bra008096
Brassica rapa
Bra008096
I
0.669
Bo2g080540
Brassica oleracea
Bo2g080540
I
0.669
Bo6g116800
Brassica oleracea
Bo6g116800
I
0.669
Bra015992
Brassica rapa
Bra015992
I
0.669
ATMYB54
Arabidopsis lyrata
Al_scaffold_0002_2037
I
0.669
Carubv10021434m.g
Capsella rubella
Carubv10021434m.g
I
0.669
Thhalv10019669m.g
Eutrema salsugineum
Thhalv10019669m.g
I
0.669
Cagra.4894s0009
Capsella grandiflora
Cagra.4894s0009
I
0.669
Bostr.10273s0016
Boechera stricta
Bostr.10273s0016
I
0.669
Lus10021762.g
Linum usitatissimum
Lus10021762.g
I
0.666
Ca_01522
Cicer arietinum
Ca_01522
I
0.665
GLYMA04G03910
Glycine max
GLYMA04G03910
I
0.665
Traes_4DL_D41CB81EA
Triticum aestivum
Traes_4DL_D41CB81EA
I
0.664
Traes_4BL_545A5716E
Triticum aestivum
Traes_4BL_545A5716E
I
0.664
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
0.664
Eucgr.F02756
Eucalyptus grandis
Eucgr.F02756
I
0.663
F775_09670
Aegilops tauschii
F775_09670
I
0.663
Carubv10023414m.g
Capsella rubella
Carubv10023414m.g
I
0.663
cassava26779.m1
Manihot esculenta
cassava26779.m1
I
0.663
Cagra.10445s0001
Capsella grandiflora
Cagra.10445s0001
I
0.663
BRADI2G55040
Brachypodium distachyon
BRADI2G55040
I
0.662
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.662
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
0.661