chr4.CM0042.120.nd (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr4.CM0042.120.nd T290711_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.CM0042.120.nd Myb 125 171
chr4.CM0042.120.nd Myb 177 222

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29681.m001315 Ricinus communis 29681.m001315 N 0.808
AMTR_s00096p00076220 Amborella trichopoda AMTR_s00096p00076220 I 0.709
Aquca_045_00020 Aquilegia coerulea Aquca_045_00020 I 0.715
BGIOSGA022369 Oryza indica BGIOSGA022369 I 0.687
Bo2g028290 Brassica oleracea Bo2g028290 I 0.707
Bo3g018490 Brassica oleracea Bo3g018490 I 0.711
Bostr.20821s0001 Boechera stricta Bostr.20821s0001 N 0.736
Bra006744 Brassica rapa Bra006744 I 0.711
Bra020346 Brassica rapa Bra020346 I 0.711
Cagra.0891s0081 Capsella grandiflora Cagra.0891s0081 I 0.711
Cagra.1398s0045 Capsella grandiflora Cagra.1398s0045 N 0.672
Carubv10003695m.g Capsella rubella Carubv10003695m.g N 0.672
Carubv10028458m.g Capsella rubella Carubv10028458m.g I 0.711
cassava19706.m1 Manihot esculenta cassava19706.m1 I 0.719
cassava26507.m1 Manihot esculenta cassava26507.m1 N 0.797
cassava26674.m1 Manihot esculenta cassava26674.m1 N 0.808
cassava9008.m1 Manihot esculenta cassava9008.m1 I 0.725
Ca_17294 Cicer arietinum Ca_17294 I 0.667
Ciclev10030254m.g Citrus clementina Ciclev10030254m.g N 0.756
Cla008304 Citrullus lanatus Cla008304 N 0.806
Cla019490 Citrullus lanatus Cla019490 I 0.686
Cucsa.146980 Cucumis sativus Cucsa.146980 N 0.828
Cucsa.196850 Cucumis sativus Cucsa.196850 I 0.686
Eucgr.B00301 Eucalyptus grandis Eucgr.B00301 I 0.675
evm.TU.supercontig_112.44 Carica papaya evm.TU.supercontig_112.44 N 0.789
evm.TU.supercontig_76.38 Carica papaya evm.TU.supercontig_76.38 I 0.685
F775_22212 Aegilops tauschii F775_22212 I 0.687
fgenesh2_kg.277__1__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.277__1__AT5G58850.1 I 0.720
fgenesh2_kg.3__2684__AT5G58850.1 Arabidopsis lyrata fgenesh2_kg.3__2684__AT5G58850.1 I 0.720
gene08006-v1.0-hybrid Fragaria vesca gene08006-v1.0-hybrid I 0.759
gene32198-v1.0-hybrid Fragaria vesca gene32198-v1.0-hybrid I 0.719
GLYMA02G39070 Glycine max GLYMA02G39070 N 0.734
GLYMA05G02300 Glycine max GLYMA05G02300 I 0.719
GLYMA14G37140 Glycine max GLYMA14G37140 N 0.724
GLYMA18G07360 Glycine max GLYMA18G07360 N 0.856
Gorai.001G115300 Gossypium raimondii Gorai.001G115300 N 0.813
Gorai.008G295800 Gossypium raimondii Gorai.008G295800 I 0.695
Gorai.011G044100 Gossypium raimondii Gorai.011G044100 N 0.813
GSMUA_Achr10G00770_001 Musa acuminata GSMUA_Achr10G00770_001 N 0.716
GSMUA_Achr6G33700_001 Musa acuminata GSMUA_Achr6G33700_001 N 0.700
GSMUA_Achr8G02290_001 Musa acuminata GSMUA_Achr8G02290_001 N 0.680
LjSGA_147332.1 Lotus japonicus LjSGA_147332.1 N 0.708
LPERR06G03780 Leersia perrieri LPERR06G03780 I 0.696
Lus10005864.g Linum usitatissimum Lus10005864.g I 0.667
Lus10018220.g Linum usitatissimum Lus10018220.g N 0.765
Lus10040684.g Linum usitatissimum Lus10040684.g N 0.761
MDP0000199939 Malus domestica MDP0000199939 I 0.675
MDP0000215359 Malus domestica MDP0000215359 I 0.695
MDP0000319656 Malus domestica MDP0000319656 I 0.795
mgf023372m Mimulus guttatus mgf023372m I 0.688
mgf024290m Mimulus guttatus mgf024290m I 0.675
MTR_3g463400 Medicago truncatula MTR_3g463400 N 0.818
MTR_4g105660 Medicago truncatula MTR_4g105660 N 0.665
MTR_5g070020 Medicago truncatula MTR_5g070020 N 0.812
MYB64 Arabidopsis thaliana AT5G11050 N 0.676
MYB64 Arabidopsis lyrata fgenesh2_kg.6__1071__AT5G11050.1 N 0.676
MYB98 Vitis vinifera VIT_17s0000g08550 I 0.719
OB06G13860 Oryza brachyantha OB06G13860 I 0.687
OBART06G04170 Oryza barthii OBART06G04170 I 0.687
OGLUM06G04280 Oryza glumaepatula OGLUM06G04280 I 0.687
OLONG_010000 Oryza longistaminata OLONG_010000 I 0.687
OMERI06G04840 Oryza meridionalis OMERI06G04840 I 0.687
ONIVA06G05390 Oryza nivara ONIVA06G05390 I 0.687
OPUNC06G03990 Oryza punctata OPUNC06G03990 I 0.687
orange1.1g046581m.g Citrus sinensis orange1.1g046581m.g N 0.756
ORGLA06G0038500 Oryza glaberrima ORGLA06G0038500 I 0.687
ORUFI06G04170 Oryza rufipogon ORUFI06G04170 I 0.687
OS06G0162700 Oryza sativa OS06G0162700 I 0.687
Pavir.J02497 Panicum virgatum Pavir.J02497 I 0.666
Pavir.J02718 Panicum virgatum Pavir.J02718 I 0.666
PDK_20s1782461g001 Phoenix dactylifera PDK_20s1782461g001 N 0.724
PGSC0003DMG400044141 Solanum tuberosum PGSC0003DMG400044141 N 0.775
Pm000541 Prunus mume Pm000541 I 0.795
Pm024743 Prunus mume Pm024743 I 0.719
POPTR_0001s25710 Populus trichocarpa POPTR_0001s25710 N 0.804
POPTR_0009s04870 Populus trichocarpa POPTR_0009s04870 N 0.794
POPTR_0012s08360 Populus trichocarpa POPTR_0012s08360 I 0.719
POPTR_0015s08880 Populus trichocarpa POPTR_0015s08880 I 0.679
PRUPE_ppa018123mg Prunus persica PRUPE_ppa018123mg I 0.795
PRUPE_ppa026791mg Prunus persica PRUPE_ppa026791mg I 0.719
SapurV1A.0041s0840 Salix purpurea SapurV1A.0041s0840 N 0.759
SapurV1A.0571s0110 Salix purpurea SapurV1A.0571s0110 I 0.685
SapurV1A.0772s0150 Salix purpurea SapurV1A.0772s0150 N 0.774
SapurV1A.2163s0040 Salix purpurea SapurV1A.2163s0040 I 0.685
Solyc06g071520.1 Solanum lycopersicum Solyc06g071520.1 I 0.680
Solyc06g076840.1 Solanum lycopersicum Solyc06g076840.1 N 0.775
TCM_012087 Theobroma cacao TCM_012087 I 0.695
TCM_041651 Theobroma cacao TCM_041651 N 0.791
Thhalv10015404m.g Eutrema salsugineum Thhalv10015404m.g N 0.736
Thhalv10016057m.g Eutrema salsugineum Thhalv10016057m.g I 0.667
Thhalv10027294m.g Eutrema salsugineum Thhalv10027294m.g N 0.736
Traes_1BL_4D9406708 Triticum aestivum Traes_1BL_4D9406708 I 0.675
Traes_1DL_918A8F357 Triticum aestivum Traes_1DL_918A8F357 I 0.674
Traes_7AS_A337F362A Triticum aestivum Traes_7AS_A337F362A I 0.687
Traes_7BS_D28CCE3B8 Triticum aestivum Traes_7BS_D28CCE3B8 I 0.687
TRIUR3_12421 Triticum urartu TRIUR3_12421 I 0.687