CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr4.CM0501.220.nd
(
Lotus japonicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
chr4.CM0501.220.nd
T290719_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr4.CM0501.220.nd
Myb
14
61
RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL
chr4.CM0501.220.nd
Myb
67
86
RGRFTPEEEKLIISLHGVVG
Links
Other
Myb/SANT
family TFs
Other
Lotus japonicus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_16981
Hordeum vulgare
MLOC_16981
I
0.824
mgf022567m
Mimulus guttatus
mgf022567m
N
0.733
SELMODRAFT_90153
Selaginella moellendorffii
SELMODRAFT_90153
N
0.730
MLOC_18177
Hordeum vulgare
MLOC_18177
I
0.721
SELMODRAFT_89380
Selaginella moellendorffii
SELMODRAFT_89380
N
0.689
SELMODRAFT_84608
Selaginella moellendorffii
SELMODRAFT_84608
N
0.689
Cla015485
Citrullus lanatus
Cla015485
N
0.670
OLONG_015294
Oryza longistaminata
OLONG_015294
N
0.667
Ca_17916
Cicer arietinum
Ca_17916
N
0.667
Bra027668
Brassica rapa
Bra027668
I
0.625