chr4.LjT12N18.150.nd (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr4.LjT12N18.150.nd T290722_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.694 0.753
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.694 0.753
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.667 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr4.LjT12N18.150.nd Myb 15 62
chr4.LjT12N18.150.nd Myb 68 113

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA026527 Oryza indica BGIOSGA026527 I 0.724
ORUFI08G25300 Oryza rufipogon ORUFI08G25300 I 0.724
ORGLA08G0216900 Oryza glaberrima ORGLA08G0216900 I 0.724
OB08G29560 Oryza brachyantha OB08G29560 I 0.724
BGIOSGA026525 Oryza indica BGIOSGA026525 I 0.724
Sb07g024890 Sorghum bicolor Sb07g024890 I 0.724
Pavir.J11802 Panicum virgatum Pavir.J11802 I 0.721
Pavir.J16675 Panicum virgatum Pavir.J16675 I 0.721
GSMUA_Achr10G16010_001 Musa acuminata GSMUA_Achr10G16010_001 I 0.720
TCM_000174 Theobroma cacao TCM_000174 I 0.714
Gorai.007G192900 Gossypium raimondii Gorai.007G192900 I 0.713
GSMUA_Achr2G20600_001 Musa acuminata GSMUA_Achr2G20600_001 I 0.711
GSMUA_Achr6G12930_001 Musa acuminata GSMUA_Achr6G12930_001 I 0.711
Si015081m.g Setaria italica Si015081m.g I 0.704
Si011098m.g Setaria italica Si011098m.g I 0.703
GSMUA_Achr10G04590_001 Musa acuminata GSMUA_Achr10G04590_001 I 0.703
Si012017m.g Setaria italica Si012017m.g I 0.703
Si012585m.g Setaria italica Si012585m.g I 0.703
POPTR_0005s11410 Populus trichocarpa POPTR_0005s11410 I 0.702
GRMZM2G084583 Zea mays GRMZM2G084583 I 0.701
Pavir.Ca00232 Panicum virgatum Pavir.Ca00232 I 0.699
Pavir.J00444 Panicum virgatum Pavir.J00444 I 0.699
Pavir.Ca00231 Panicum virgatum Pavir.Ca00231 I 0.699
SapurV1A.0591s0010 Salix purpurea SapurV1A.0591s0010 I 0.698
SapurV1A.1127s0040 Salix purpurea SapurV1A.1127s0040 I 0.698
Gorai.005G254000 Gossypium raimondii Gorai.005G254000 I 0.698
GSMUA_Achr8G33900_001 Musa acuminata GSMUA_Achr8G33900_001 I 0.698
GSMUA_Achr1G26520_001 Musa acuminata GSMUA_Achr1G26520_001 I 0.698
POPTR_0004s14510 Populus trichocarpa POPTR_0004s14510 I 0.698
Cla016084 Citrullus lanatus Cla016084 I 0.696
GRMZM2G419239 Zea mays GRMZM2G419239 I 0.696
Cucsa.370600 Cucumis sativus Cucsa.370600 I 0.696
ORUFI09G19350 Oryza rufipogon ORUFI09G19350 I 0.694
Traes_4BS_6253482BD Triticum aestivum Traes_4BS_6253482BD I 0.694
Pavir.Bb02469 Panicum virgatum Pavir.Bb02469 I 0.694
OGLUM11G04790 Oryza glumaepatula OGLUM11G04790 I 0.694
ORUFI11G04860 Oryza rufipogon ORUFI11G04860 I 0.694
orange1.1g023056m.g Citrus sinensis orange1.1g023056m.g I 0.694
OBART11G04950 Oryza barthii OBART11G04950 I 0.694
BGIOSGA029363 Oryza indica BGIOSGA029363 I 0.694
Pavir.Ba01213 Panicum virgatum Pavir.Ba01213 I 0.694
ORGLA11G0047500 Oryza glaberrima ORGLA11G0047500 I 0.694
ORGLA09G0141200 Oryza glaberrima ORGLA09G0141200 I 0.694
Ciclev10028908m.g Citrus clementina Ciclev10028908m.g I 0.694
Traes_4AL_CC5803BED Triticum aestivum Traes_4AL_CC5803BED I 0.694
Thhalv10025886m.g Eutrema salsugineum Thhalv10025886m.g I 0.694
ONIVA11G05280 Oryza nivara ONIVA11G05280 I 0.694
OPUNC11G04750 Oryza punctata OPUNC11G04750 I 0.694
BGIOSGA034924 Oryza indica BGIOSGA034924 I 0.694
PGSC0003DMG400031317 Solanum tuberosum PGSC0003DMG400031317 I 0.694
Gorai.008G035700 Gossypium raimondii Gorai.008G035700 I 0.694
Sb08g004720 Sorghum bicolor Sb08g004720 I 0.694
evm.TU.supercontig_37.149 Carica papaya evm.TU.supercontig_37.149 I 0.694
Sb02g031190 Sorghum bicolor Sb02g031190 I 0.694
PK29029.1 Cannabis sativa PK29029.1 I 0.694
Si030943m.g Setaria italica Si030943m.g I 0.694
MYB4 Arabidopsis thaliana AT4G38620 D 0.694
gene07646-v1.0-hybrid Fragaria vesca gene07646-v1.0-hybrid I 0.694
Gorai.002G196700 Gossypium raimondii Gorai.002G196700 I 0.694
Eucgr.I01406 Eucalyptus grandis Eucgr.I01406 I 0.694
Solyc06g065100.2 Solanum lycopersicum Solyc06g065100.2 I 0.694
orange1.1g021503m.g Citrus sinensis orange1.1g021503m.g I 0.694
TCM_006638 Theobroma cacao TCM_006638 I 0.694
OS09G0538400 Oryza sativa OS09G0538400 I 0.694
MDP0000249611 Malus domestica MDP0000249611 I 0.694
BRADI4G23967 Brachypodium distachyon BRADI4G23967 I 0.694
PRUPE_ppa010277mg Prunus persica PRUPE_ppa010277mg I 0.694
Solyc10g055410.1 Solanum lycopersicum Solyc10g055410.1 I 0.694
POPTR_0009s13640 Populus trichocarpa POPTR_0009s13640 I 0.694
cassava30431.valid.m1 Manihot esculenta cassava30431.valid.m1 I 0.694
Traes_4DS_7BFAC49C2 Triticum aestivum Traes_4DS_7BFAC49C2 I 0.694
Cla020592 Citrullus lanatus Cla020592 I 0.694
Pm020852 Prunus mume Pm020852 I 0.694
GRMZM2G000818 Zea mays GRMZM2G000818 I 0.694
Bostr.25542s0045 Boechera stricta Bostr.25542s0045 I 0.694
Bra033572 Brassica rapa Bra033572 I 0.694
GSMUA_Achr6G07260_001 Musa acuminata GSMUA_Achr6G07260_001 I 0.694
Bra010736 Brassica rapa Bra010736 I 0.694
OB11G14080 Oryza brachyantha OB11G14080 I 0.694
29602.m000218 Ricinus communis 29602.m000218 I 0.694
GLYMA12G03600 Glycine max GLYMA12G03600 I 0.694
F775_31191 Aegilops tauschii F775_31191 I 0.694
cassava29150.valid.m1 Manihot esculenta cassava29150.valid.m1 I 0.694
BRADI4G36460 Brachypodium distachyon BRADI4G36460 I 0.694
ATMYB4 Arabidopsis lyrata fgenesh2_kg.7__59__AT4G38620.1 I 0.694
Cucsa.234310 Cucumis sativus Cucsa.234310 I 0.694
GLYMA11G11450 Glycine max GLYMA11G11450 I 0.694
GLYMA06G00630 Glycine max GLYMA06G00630 I 0.694
GLYMA04G00550 Glycine max GLYMA04G00550 I 0.694
Bo7g119670 Brassica oleracea Bo7g119670 I 0.694
Ca_11026 Cicer arietinum Ca_11026 I 0.694
Ciclev10002068m.g Citrus clementina Ciclev10002068m.g I 0.694
Traes_5AL_56F30392D Triticum aestivum Traes_5AL_56F30392D I 0.694
AMTR_s00139p00079430 Amborella trichopoda AMTR_s00139p00079430 I 0.694
MLOC_65957 Hordeum vulgare MLOC_65957 I 0.694
SapurV1A.0923s0040 Salix purpurea SapurV1A.0923s0040 I 0.694
Traes_5DL_1868E2A6C Triticum aestivum Traes_5DL_1868E2A6C I 0.694
Traes_5BL_AED68C680 Triticum aestivum Traes_5BL_AED68C680 I 0.694
MTR_4g073420 Medicago truncatula MTR_4g073420 I 0.694
LPERR11G04310 Leersia perrieri LPERR11G04310 I 0.694
OB09G24400 Oryza brachyantha OB09G24400 I 0.694
GSMUA_Achr9G08600_001 Musa acuminata GSMUA_Achr9G08600_001 I 0.694
VIT_03s0038g02310 Vitis vinifera VIT_03s0038g02310 I 0.694
Bo3g149450 Brassica oleracea Bo3g149450 I 0.694
GSMUA_Achr9G24180_001 Musa acuminata GSMUA_Achr9G24180_001 I 0.694
TRIUR3_11890 Triticum urartu TRIUR3_11890 I 0.694
e_gw1.6.239.1 Physcomitrella patens e_gw1.6.239.1 I 0.693
GSMUA_Achr3G22200_001 Musa acuminata GSMUA_Achr3G22200_001 I 0.692
GSMUA_Achr6G25420_001 Musa acuminata GSMUA_Achr6G25420_001 I 0.690
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.689
POPTR_0018s05750 Populus trichocarpa POPTR_0018s05750 I 0.689
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.689
MTR_3g011610 Medicago truncatula MTR_3g011610 I 0.686
GSMUA_Achr1G02420_001 Musa acuminata GSMUA_Achr1G02420_001 I 0.685
mgf012705m Mimulus guttatus mgf012705m I 0.685
SapurV1A.0130s0360 Salix purpurea SapurV1A.0130s0360 I 0.685
Lus10000411.g Linum usitatissimum Lus10000411.g I 0.685
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.685
OS05G0429900 Oryza sativa OS05G0429900 I 0.683
GRMZM2G041415 Zea mays GRMZM2G041415 I 0.683
MLOC_71041 Hordeum vulgare MLOC_71041 I 0.683
BRADI2G24400 Brachypodium distachyon BRADI2G24400 I 0.683
ORUFI05G18670 Oryza rufipogon ORUFI05G18670 I 0.683
BGIOSGA018002 Oryza indica BGIOSGA018002 I 0.683
OLONG_019401 Oryza longistaminata OLONG_019401 I 0.682
GRMZM2G089244 Zea mays GRMZM2G089244 I 0.682
Lus10041888.g Linum usitatissimum Lus10041888.g I 0.681
Lus10028435.g Linum usitatissimum Lus10028435.g I 0.681
BGIOSGA004902 Oryza indica BGIOSGA004902 I 0.680
TRIUR3_22555 Triticum urartu TRIUR3_22555 I 0.680
GSMUA_Achr8G32480_001 Musa acuminata GSMUA_Achr8G32480_001 I 0.680
Carubv10005438m.g Capsella rubella Carubv10005438m.g I 0.680
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.680
F775_17298 Aegilops tauschii F775_17298 I 0.680
Pavir.J01502 Panicum virgatum Pavir.J01502 I 0.680
Bostr.7867s1358 Boechera stricta Bostr.7867s1358 I 0.680
Cagra.2350s0045 Capsella grandiflora Cagra.2350s0045 I 0.680
MLOC_69570 Hordeum vulgare MLOC_69570 I 0.680
ORGLA01G0328800 Oryza glaberrima ORGLA01G0328800 I 0.680
TRAES3BF044400110CFD_g Triticum aestivum TRAES3BF044400110CFD_g I 0.680
OS01G0874300 Oryza sativa OS01G0874300 I 0.680
OB01G47670 Oryza brachyantha OB01G47670 I 0.680
MYB32 Arabidopsis thaliana AT4G34990 I 0.680
Pavir.Ea03682 Panicum virgatum Pavir.Ea03682 I 0.680
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.679
GSMUA_Achr1G07550_001 Musa acuminata GSMUA_Achr1G07550_001 I 0.679
MTR_3g097450 Medicago truncatula MTR_3g097450 I 0.677
Pm015303 Prunus mume Pm015303 I 0.675
Pm014372 Prunus mume Pm014372 I 0.673
PRUPE_ppa010716mg Prunus persica PRUPE_ppa010716mg I 0.673
Pavir.Hb01732 Panicum virgatum Pavir.Hb01732 I 0.673
GRMZM2G124715 Zea mays GRMZM2G124715 I 0.673
Aquca_006_00250 Aquilegia coerulea Aquca_006_00250 I 0.673
AMTR_s00055p00057500 Amborella trichopoda AMTR_s00055p00057500 I 0.673
VIT_04s0023g03710 Vitis vinifera VIT_04s0023g03710 I 0.673
Pavir.Ha00871 Panicum virgatum Pavir.Ha00871 I 0.673
GRMZM2G077789 Zea mays GRMZM2G077789 I 0.672
TCM_004777 Theobroma cacao TCM_004777 I 0.672
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I 0.671
GSMUA_AchrUn_randomG28780_001 Musa acuminata GSMUA_AchrUn_randomG28780_001 I 0.670
GRMZM2G050305 Zea mays GRMZM2G050305 I 0.670
OS11G0180900 Oryza sativa OS11G0180900 I 0.670
Eucgr.G01774 Eucalyptus grandis Eucgr.G01774 I 0.670
Si026734m.g Setaria italica Si026734m.g I 0.669
LjSGA_007368.1 Lotus japonicus LjSGA_007368.1 I 0.668
Gorai.009G288900 Gossypium raimondii Gorai.009G288900 I 0.668
Eucgr.I00012 Eucalyptus grandis Eucgr.I00012 I 0.668
POPTR_0019s00750 Populus trichocarpa POPTR_0019s00750 I 0.668
Ca_16913 Cicer arietinum Ca_16913 I 0.668
GLYMA06G16820 Glycine max GLYMA06G16820 I 0.668
cassava4975.m1 Manihot esculenta cassava4975.m1 I 0.668
GLYMA04G38240 Glycine max GLYMA04G38240 I 0.668
cassava1644.valid.m1 Manihot esculenta cassava1644.valid.m1 I 0.668
GAMYB Oryza sativa OS01G0812000 I 0.667
GAM1 Oryza indica BGIOSGA004670 I 0.667
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.667
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.667
OB01G43550 Oryza brachyantha OB01G43550 I 0.667
OBART01G34660 Oryza barthii OBART01G34660 I 0.667
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.667
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.667
evm.TU.supercontig_6.280 Carica papaya evm.TU.supercontig_6.280 I 0.667
Cla013880 Citrullus lanatus Cla013880 I 0.667
VIT_13s0067g01630 Vitis vinifera VIT_13s0067g01630 I 0.667
TCM_010778 Theobroma cacao TCM_010778 I 0.666
Si040527m.g Setaria italica Si040527m.g I 0.665
Sb01g019270 Sorghum bicolor Sb01g019270 I 0.665
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I 0.665
Pavir.J09313 Panicum virgatum Pavir.J09313 I 0.665
PGSC0003DMG400013215 Solanum tuberosum PGSC0003DMG400013215 I 0.664
Bostr.18351s0132 Boechera stricta Bostr.18351s0132 I 0.664
Ca_25013 Cicer arietinum Ca_25013 I 0.664
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.664
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I 0.664
Cla012721 Citrullus lanatus Cla012721 I 0.664
MTR_8g095390 Medicago truncatula MTR_8g095390 I 0.664
cassava16245.m1 Manihot esculenta cassava16245.m1 I 0.664
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.664
28154.m000040 Ricinus communis 28154.m000040 I 0.664
GLYMA13G25716 Glycine max GLYMA13G25716 I 0.664
POPTR_0004s18020 Populus trichocarpa POPTR_0004s18020 I 0.664
MTR_8g042410 Medicago truncatula MTR_8g042410 I 0.664
Pm004199 Prunus mume Pm004199 I 0.664
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.664
MYB7 Vitis vinifera VIT_07s0130g00040 I 0.664
Solyc01g111500.2 Solanum lycopersicum Solyc01g111500.2 I 0.664
cassava35464.valid.m1 Manihot esculenta cassava35464.valid.m1 I 0.664
Eucgr.G03183 Eucalyptus grandis Eucgr.G03183 I 0.664
TCM_036404 Theobroma cacao TCM_036404 I 0.664
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.664
Thhalv10022799m.g Eutrema salsugineum Thhalv10022799m.g I 0.664
PK21058.1 Cannabis sativa PK21058.1 I 0.664
Carubv10005426m.g Capsella rubella Carubv10005426m.g I 0.664
Carubv10014371m.g Capsella rubella Carubv10014371m.g I 0.664
Lus10014129.g Linum usitatissimum Lus10014129.g I 0.664
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.664
Cagra.1533s0005 Capsella grandiflora Cagra.1533s0005 I 0.664
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I 0.664
MYB7 Arabidopsis thaliana AT2G16720 I 0.664
Cagra.1383s0046 Capsella grandiflora Cagra.1383s0046 I 0.664
TCM_004509 Theobroma cacao TCM_004509 I 0.663
TCM_037555 Theobroma cacao TCM_037555 I 0.663
AMTR_s00038p00150140 Amborella trichopoda AMTR_s00038p00150140 I 0.663
MLOC_63914 Hordeum vulgare MLOC_63914 I 0.663
Traes_5BS_B41FDD6AA Triticum aestivum Traes_5BS_B41FDD6AA I 0.663
Traes_5BL_87924B626 Triticum aestivum Traes_5BL_87924B626 I 0.663
Cucsa.364400 Cucumis sativus Cucsa.364400 I 0.663
Traes_5DL_8ABCB84A7 Triticum aestivum Traes_5DL_8ABCB84A7 I 0.663
Sb10g023665 Sorghum bicolor Sb10g023665 I 0.662
Si007070m.g Setaria italica Si007070m.g I 0.662
Pavir.Da00534 Panicum virgatum Pavir.Da00534 I 0.662
Lus10009448.g Linum usitatissimum Lus10009448.g I 0.661
MYB7 Arabidopsis lyrata scaffold_303957.1 I 0.661