chr5.LjT32I14.90.nd (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr5.LjT32I14.90.nd T290736_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.718 0.787
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.700 0.766
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.678 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.LjT32I14.90.nd Myb 205 255

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CM1729.100.nc Lotus japonicus CM1729.100.nc I 0.848
GRMZM2G360523 Zea mays GRMZM2G360523 I 0.792
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.761
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.761
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.749
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I 0.749
Cla021325 Citrullus lanatus Cla021325 I 0.749
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.749
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.749
RR23 Oryza sativa OS02G0796500 I 0.749
RR22 Oryza sativa OS06G0183100 I 0.749
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.749
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.749
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.749
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.749
OB02G42700 Oryza brachyantha OB02G42700 I 0.749
Si016546m.g Setaria italica Si016546m.g I 0.749
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.749
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.749
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.749
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.749
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.749
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.749
OB06G14930 Oryza brachyantha OB06G14930 I 0.749
Pm005710 Prunus mume Pm005710 I 0.749
Si006013m.g Setaria italica Si006013m.g I 0.749
OBART06G05360 Oryza barthii OBART06G05360 I 0.749
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.749
TCM_036926 Theobroma cacao TCM_036926 I 0.749
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.749
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.749
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.749
F775_14758 Aegilops tauschii F775_14758 I 0.749
F775_19079 Aegilops tauschii F775_19079 I 0.749
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.749
RR22 Oryza indica BGIOSGA022430 I 0.749
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.749
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.749
RR23 Oryza indica BGIOSGA005436 I 0.749
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.749
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.749
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.749
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.749
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.749
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.749
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.749
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.749
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.749
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.749
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.749
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.749
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.749
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.749
Sb05g004150 Sorghum bicolor Sb05g004150 I 0.743
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.742
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.738
Si016630m.g Setaria italica Si016630m.g I 0.736
Pavir.Aa03151 Panicum virgatum Pavir.Aa03151 I 0.736
Pavir.Ab00568 Panicum virgatum Pavir.Ab00568 I 0.736
F775_13501 Aegilops tauschii F775_13501 I 0.736
GRMZM2G060485 Zea mays GRMZM2G060485 I 0.736
Traes_6DS_EF4A57213 Triticum aestivum Traes_6DS_EF4A57213 I 0.736
MLOC_3955 Hordeum vulgare MLOC_3955 I 0.736
BRADI3G06120 Brachypodium distachyon BRADI3G06120 I 0.736
Sb04g005580 Sorghum bicolor Sb04g005580 I 0.736
TRIUR3_31924 Triticum urartu TRIUR3_31924 I 0.736
Traes_6AS_A42E71A00 Triticum aestivum Traes_6AS_A42E71A00 I 0.736
Traes_6BS_B50BEBC7E Triticum aestivum Traes_6BS_B50BEBC7E I 0.736
mgf001591m Mimulus guttatus mgf001591m I 0.734
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.734
mgf014863m Mimulus guttatus mgf014863m I 0.734
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.734
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.734
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.723
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I 0.722
ONIVA02G07230 Oryza nivara ONIVA02G07230 I 0.721
LPERR02G05460 Leersia perrieri LPERR02G05460 I 0.721
OMERI02G07120 Oryza meridionalis OMERI02G07120 I 0.721
ORGLA02G0057500 Oryza glaberrima ORGLA02G0057500 I 0.721
RR24 Oryza sativa OS02G0182100 I 0.721
OB02G15530 Oryza brachyantha OB02G15530 I 0.721
OBART02G06200 Oryza barthii OBART02G06200 I 0.721
RR24 Oryza indica BGIOSGA007015 I 0.721
OGLUM02G06200 Oryza glumaepatula OGLUM02G06200 I 0.721
OLONG_007266 Oryza longistaminata OLONG_007266 I 0.721
ORUFI02G06340 Oryza rufipogon ORUFI02G06340 I 0.721
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.718
MDP0000290818 Malus domestica MDP0000290818 I 0.718
PK26059.1 Cannabis sativa PK26059.1 I 0.718
MDP0000224740 Malus domestica MDP0000224740 I 0.718
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.718
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.718
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.718
Ca_02989 Cicer arietinum Ca_02989 I 0.718
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.718
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.718
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.718
e_gw1.362.4.1 Physcomitrella patens e_gw1.362.4.1 D 0.718
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.718
29889.m003245 Ricinus communis 29889.m003245 I 0.718
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.718
Cla009424 Citrullus lanatus Cla009424 I 0.718
Cla022101 Citrullus lanatus Cla022101 I 0.718
estExt_fgenesh2_pg.C_Chr_100175 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_100175 I 0.718
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.718
TCM_021300 Theobroma cacao TCM_021300 I 0.718
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.718
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.718
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.718
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.718
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.718
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.718
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.718
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.718
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.718
MTR_3g106220 Medicago truncatula MTR_3g106220 I 0.718
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.718
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.718
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.718
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.718
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.716
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.711
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.711
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.711
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.711
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.711
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.711
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.711
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.711
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.711
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.711
TCM_011067 Theobroma cacao TCM_011067 I 0.711
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.711
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.711
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.711
27647.m000179 Ricinus communis 27647.m000179 I 0.711
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.711
GRMZM2G401835 Zea mays GRMZM2G401835 I 0.710
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.709
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.709
mgf010113m Mimulus guttatus mgf010113m I 0.709
mgf012203m Mimulus guttatus mgf012203m I 0.709
GSMUA_Achr3G13400_001 Musa acuminata GSMUA_Achr3G13400_001 I 0.707
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.703
OSTLU_5500 Ostreococcus lucimarinus OSTLU_5500 I 0.700
e_gw1.1.649.1 Ostreococcus RCC809 e_gw1.1.649.1 I 0.700
SELMODRAFT_418787 Selaginella moellendorffii SELMODRAFT_418787 I 0.700
SELMODRAFT_187683 Selaginella moellendorffii SELMODRAFT_187683 I 0.700
estExt_fgenesh1_pg.C_Chr_16.00010090 Ostreococcus tauri estExt_fgenesh1_pg.C_Chr_16.00010090 D 0.700
SELMODRAFT_442188 Selaginella moellendorffii SELMODRAFT_442188 I 0.698
SELMODRAFT_150746 Selaginella moellendorffii SELMODRAFT_150746 I 0.698
gene05178-v1.0-hybrid Fragaria vesca gene05178-v1.0-hybrid I 0.698
evm.TU.supercontig_127.10 Carica papaya evm.TU.supercontig_127.10 I 0.696
Traes_7BS_17C8D2707 Triticum aestivum Traes_7BS_17C8D2707 I 0.696
Traes_7AS_1318B59D3 Triticum aestivum Traes_7AS_1318B59D3 I 0.696
OLONG_005451 Oryza longistaminata OLONG_005451 I 0.696
GSMUA_AchrUn_randomG18820_001 Musa acuminata GSMUA_AchrUn_randomG18820_001 I 0.696
MTR_1g013180 Medicago truncatula MTR_1g013180 I 0.690
SapurV1A.0705s0030 Salix purpurea SapurV1A.0705s0030 I 0.689
Traes_6DL_D1C9CE275 Triticum aestivum Traes_6DL_D1C9CE275 I 0.689
PK02601.1 Cannabis sativa PK02601.1 I 0.689
BRADI3G54120 Brachypodium distachyon BRADI3G54120 I 0.689
BRADI1G47400 Brachypodium distachyon BRADI1G47400 I 0.689
GLYMA17G33230 Glycine max GLYMA17G33230 I 0.689
Traes_6BL_790C095EE Triticum aestivum Traes_6BL_790C095EE I 0.689
MLOC_76165 Hordeum vulgare MLOC_76165 I 0.689
e_gw1.10.288.1 Physcomitrella patens e_gw1.10.288.1 I 0.686
gene15029-v1.0-hybrid Fragaria vesca gene15029-v1.0-hybrid I 0.682
Lus10019058.g Linum usitatissimum Lus10019058.g I 0.681
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.679
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.678
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.678
ARR18 Arabidopsis thaliana AT5G58080 D 0.678
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.678
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.678
Solyc10g080960.1 Solanum lycopersicum Solyc10g080960.1 I 0.675
PGSC0003DMG400028100 Solanum tuberosum PGSC0003DMG400028100 I 0.675
GRMZM2G471600 Zea mays GRMZM2G471600 I 0.675
Lus10036303.g Linum usitatissimum Lus10036303.g I 0.674
Aquca_009_00923 Aquilegia coerulea Aquca_009_00923 I 0.673
Cucsa.069440 Cucumis sativus Cucsa.069440 I 0.672
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.671
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.671
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.671
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.671
CHLREDRAFT_113139 Chlamydomonas reinhardtii CHLREDRAFT_113139 I 0.668
Traes_6AL_9C9D677D4 Triticum aestivum Traes_6AL_9C9D677D4 I 0.668
PDK_20s1451831g001 Phoenix dactylifera PDK_20s1451831g001 I 0.665
cassava40494.m1 Manihot esculenta cassava40494.m1 I 0.665
e_gw1.16.93.1 Physcomitrella patens e_gw1.16.93.1 I 0.665
AMTR_s00019p00208460 Amborella trichopoda AMTR_s00019p00208460 I 0.661