chr5.LjT42I01.50.nd (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr5.LjT42I01.50.nd T290737_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.662 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr5.LjT42I01.50.nd Myb 48 99

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_14198 Cicer arietinum Ca_14198 N 0.849
cassava12253.valid.m1 Manihot esculenta cassava12253.valid.m1 N 0.822
PK00827.1 Cannabis sativa PK00827.1 N 0.819
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.810
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.810
Cla011853 Citrullus lanatus Cla011853 N 0.801
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.801
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.801
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.801
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.801
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.801
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.801
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.801
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.801
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.801
Bo2g007410 Brassica oleracea Bo2g007410 N 0.801
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.801
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.801
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.801
Bo9g175820 Brassica oleracea Bo9g175820 I 0.801
28582.m000316 Ricinus communis 28582.m000316 N 0.801
Bra028717 Brassica rapa Bra028717 N 0.801
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.801
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.801
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.800
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.786
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.786
Pm025973 Prunus mume Pm025973 N 0.783
28582.m000318 Ricinus communis 28582.m000318 N 0.783
TCM_024886 Theobroma cacao TCM_024886 N 0.783
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.783
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.783
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.783
MDP0000253656 Malus domestica MDP0000253656 N 0.783
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.783
MDP0000184307 Malus domestica MDP0000184307 N 0.783
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.783
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.783
Bra009228 Brassica rapa Bra009228 I 0.783
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.781
Bo3g004040 Brassica oleracea Bo3g004040 N 0.777
Bra005912 Brassica rapa Bra005912 N 0.777
MDP0000280005 Malus domestica MDP0000280005 N 0.777
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.770
28582.m000317 Ricinus communis 28582.m000317 N 0.764
mgf007532m Mimulus guttatus mgf007532m N 0.759
mgf007985m Mimulus guttatus mgf007985m N 0.759
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.753
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.753
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.749
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.749
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.749
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.734
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.734
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.734
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.734
VIT_08s0007g06310 Vitis vinifera VIT_08s0007g06310 I 0.718
GSMUA_Achr7G06370_001 Musa acuminata GSMUA_Achr7G06370_001 I 0.712
mgf017208m Mimulus guttatus mgf017208m N 0.710
Ca_07304 Cicer arietinum Ca_07304 I 0.708
30226.m001993 Ricinus communis 30226.m001993 N 0.703
POPTR_0453s00230 Populus trichocarpa POPTR_0453s00230 N 0.701
AMTR_s00022p00190540 Amborella trichopoda AMTR_s00022p00190540 I 0.700
VIT_08s0007g06180 Vitis vinifera VIT_08s0007g06180 I 0.696
VIT_13s0156g00390 Vitis vinifera VIT_13s0156g00390 I 0.692
OB04G35670 Oryza brachyantha OB04G35670 I 0.691
OBART04G28680 Oryza barthii OBART04G28680 I 0.691
OGLUM04G28560 Oryza glumaepatula OGLUM04G28560 I 0.691
OMERI04G24260 Oryza meridionalis OMERI04G24260 I 0.691
BRADI5G25320 Brachypodium distachyon BRADI5G25320 I 0.691
BGIOSGA014151 Oryza indica BGIOSGA014151 I 0.691
Pavir.Ga00160 Panicum virgatum Pavir.Ga00160 I 0.691
ONIVA04G27220 Oryza nivara ONIVA04G27220 I 0.691
GRMZM2G124495 Zea mays GRMZM2G124495 I 0.691
LPERR04G24240 Leersia perrieri LPERR04G24240 I 0.691
OLONG_005000 Oryza longistaminata OLONG_005000 I 0.691
Sb06g031970 Sorghum bicolor Sb06g031970 I 0.691
OPUNC04G26200 Oryza punctata OPUNC04G26200 I 0.691
OS04G0665600 Oryza sativa OS04G0665600 I 0.691
ORUFI04G30350 Oryza rufipogon ORUFI04G30350 I 0.691
Si022099m.g Setaria italica Si022099m.g I 0.691
ORGLA04G0249600 Oryza glaberrima ORGLA04G0249600 I 0.691
GSMUA_Achr4G19300_001 Musa acuminata GSMUA_Achr4G19300_001 I 0.690
chr1.LjT38A19.30.nc Lotus japonicus chr1.LjT38A19.30.nc N 0.688
cassava16780.m1 Manihot esculenta cassava16780.m1 I 0.685
Pavir.J05593 Panicum virgatum Pavir.J05593 I 0.680
MDP0000121180 Malus domestica MDP0000121180 N 0.668
MDP0000179986 Malus domestica MDP0000179986 N 0.668
estExt_fgenesh1_pg.C_4900005 Physcomitrella patens estExt_fgenesh1_pg.C_4900005 I 0.667
Thhalv10025330m.g Eutrema salsugineum Thhalv10025330m.g I 0.662
PHR1 Arabidopsis thaliana AT4G28610 D 0.662
Bostr.7867s0704 Boechera stricta Bostr.7867s0704 I 0.662
Cagra.1225s0029 Capsella grandiflora Cagra.1225s0029 I 0.662
PHR1 Arabidopsis lyrata fgenesh2_kg.7__1335__AT4G28610.1 I 0.662
Bra010355 Brassica rapa Bra010355 I 0.662
Bo8g054450 Brassica oleracea Bo8g054450 I 0.662