CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_kg.C_2070034
(
Phytophthora capsici
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
estExt_fgenesh1_kg.C_2070034
T290792_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_kg.C_2070034
Myb
19
65
VGMWTEDEHARFLEGVKLFSSGPWKRVAAYVGTRNVRQTMTHAQKYR
Links
Other
Myb/SANT
family TFs
Other
Phytophthora capsici
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo138282
Phytophthora sojae
Physo138282
N
0.909
F443_00625
Phytophthora parasitica
F443_00625
N
0.909
PITG_10310
Phytophthora infestans
PITG_10310
N
0.909
HpaG809807
Hyaloperonospora arabidopsidis
HpaG809807
N
0.888
Phyra85497
Phytophthora ramorum
Phyra85497
N
0.828
snap_masked-pve_contig_397-abinit-gene-0.26
Pythium vexans
snap_masked-pve_contig_397-abinit-gene-0.26
N
0.775
maker-piw_contig_637-snap-gene-0.12
Pythium iwayamai
maker-piw_contig_637-snap-gene-0.12
N
0.738
PYU1_G002847
Pythium ultimum
PYU1_G002847
N
0.738
PYU1_G002849
Pythium ultimum
PYU1_G002849
I
0.734
maker-piw_contig_637-fgenesh-gene-0.5
Pythium iwayamai
maker-piw_contig_637-fgenesh-gene-0.5
I
0.716
PITG_14400
Phytophthora infestans
PITG_14400
I
0.716
maker-pir_contig_516-fgenesh-gene-0.8
Pythium irregulare
maker-pir_contig_516-fgenesh-gene-0.8
N
0.716
F443_20671
Phytophthora parasitica
F443_20671
I
0.716
estExt_fgenesh1_pm.C_680840001
Phytophthora capsici
estExt_fgenesh1_pm.C_680840001
N
0.716
fgenesh1_kg.C_scaffold_15000102
Phytophthora capsici
fgenesh1_kg.C_scaffold_15000102
I
0.716
estExt_Genewise1Plus.C_2050016
Phytophthora capsici
estExt_Genewise1Plus.C_2050016
I
0.708
F443_20702
Phytophthora parasitica
F443_20702
I
0.708
PYU1_G002844
Pythium ultimum
PYU1_G002844
N
0.704
fgenesh_scip_prom.46568.9768
Phytophthora kernoviae
fgenesh_scip_prom.46568.9768
N
0.704
HpaG810857
Hyaloperonospora arabidopsidis
HpaG810857
I
0.704
Phyra80922
Phytophthora ramorum
Phyra80922
N
0.704
maker-pir_contig_516-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_516-fgenesh-gene-0.3
N
0.704
Physo132965
Phytophthora sojae
Physo132965
N
0.704
maker-pve_contig_506-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_506-fgenesh-gene-0.3
N
0.699
ALNC14_029500
Albugo laibachii
ALNC14_029500
N
0.673
maker-pag1_scaffold_266-snap-gene-0.11
Pythium aphanidermatum
maker-pag1_scaffold_266-snap-gene-0.11
I
0.665
Physo132945
Phytophthora sojae
Physo132945
I
0.665
maker-pag1_scaffold_154-snap-gene-0.25
Pythium aphanidermatum
maker-pag1_scaffold_154-snap-gene-0.25
N
0.665
maker-par_contig_3706-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_3706-snap-gene-0.1
N
0.661