CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_Chr_16.00010090
(
Ostreococcus tauri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
estExt_fgenesh1_pg.C_Chr_16.00010090
T290810_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN
NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN
NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.849
0.915
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.740
0.830
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.740
0.830
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.705
0.830
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.702
0.830
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.679
0.830
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.675
0.702
For this family, TFs with SR scores >
0.661
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02367_2.00
Myb
51
101
RVVWSAELHTQFVTAVNQLGIDKAVPKRILDLMGIQGLTRENVASHLQKYR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_Chr_16.00010090
Myb
214
264
RVVWSAELHTQFVTAVNQLGIDKAVPKRILDLMGIQGLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Ostreococcus tauri
TFs
391 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy