LjSGA_026914.2 (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 LjSGA_026914.2 T290952_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW

WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.704 0.710
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW

WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.704 0.710
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH

DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.704 0.710
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC

GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.704 0.688
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM

KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.704 0.688
GAM1_ORYSI
M11055_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.704 0.688
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.703 0.710
MYB101
M07051_2.00
Arabidopsis thaliana
NWHHNWAACCGWWHH

DDWWCGGTTWNDDWN
Dap-seq
OMalley et al.(2016)
MYB101_col_a
0.699 0.710
MYB101
M07052_2.00
Arabidopsis thaliana
DHHHVTAACYGWHWN

NWDWCRGTTABDDDH
Dap-seq
OMalley et al.(2016)
MYB101_colamp_a
0.699 0.710
ATMYB65
M01076_2.00
Arabidopsis thaliana
HAACNRHHN

NDDYNGTTD
PBM
Sullivan et al.(2014)
pTH7084
0.691 0.710
ATMYB65
M07076_2.00
Arabidopsis thaliana
DHHNTAACBGHMW

WKDCVGTTANDDH
Dap-seq
OMalley et al.(2016)
MYB65_col200_a
0.691 0.710
ATMYB65
M07077_2.00
Arabidopsis thaliana
NTAACYGHMWHNDHN

NDHNDWKDCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB65_colamp_a
0.691 0.710
MYB33
M02306_2.00
Arabidopsis thaliana
HAACNRHHNN

NNDDYNGTTD
PBM
Weirauch et al.(2014)
pTH8204
0.662 0.677
MYB33
M07120_2.00
Arabidopsis thaliana
NTAACYGWHWH

DWDWCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB33_col_a
0.662 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_026914.2 Myb 35 82
LjSGA_026914.2 Myb 88 133

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA13G38521 Glycine max GLYMA13G38521 I 0.743
GLYMA12G31950 Glycine max GLYMA12G31950 I 0.743
VIT_19s0090g00590 Vitis vinifera VIT_19s0090g00590 I 0.733
Bo4g046000 Brassica oleracea Bo4g046000 I 0.729
Bra005597 Brassica rapa Bra005597 I 0.729
GLYMA15G35860 Glycine max GLYMA15G35860 I 0.720
MTR_2g088170 Medicago truncatula MTR_2g088170 I 0.718
Ca_07119 Cicer arietinum Ca_07119 I 0.718
orange1.1g046419m.g Citrus sinensis orange1.1g046419m.g I 0.712
Ciclev10010620m.g Citrus clementina Ciclev10010620m.g I 0.712
PDK_20s1831811g001 Phoenix dactylifera PDK_20s1831811g001 I 0.711
29823.m000215 Ricinus communis 29823.m000215 I 0.710
TCM_011907 Theobroma cacao TCM_011907 I 0.708
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I 0.708
LPERR05G16930 Leersia perrieri LPERR05G16930 I 0.708
MDP0000176798 Malus domestica MDP0000176798 I 0.708
MDP0000151688 Malus domestica MDP0000151688 I 0.708
PRUPE_ppa017451mg Prunus persica PRUPE_ppa017451mg I 0.708
gene23946-v1.0-hybrid Fragaria vesca gene23946-v1.0-hybrid I 0.708
Pm015094 Prunus mume Pm015094 I 0.708
Bo1g141040 Brassica oleracea Bo1g141040 I 0.708
Aquca_005_00025 Aquilegia coerulea Aquca_005_00025 I 0.708
Bra002042 Brassica rapa Bra002042 I 0.708
PGSC0003DMG400013897 Solanum tuberosum PGSC0003DMG400013897 I 0.707
Ca_06236 Cicer arietinum Ca_06236 I 0.706
SELMODRAFT_117411 Selaginella moellendorffii SELMODRAFT_117411 I 0.705
SELMODRAFT_84369 Selaginella moellendorffii SELMODRAFT_84369 I 0.705
Gam1 Hordeum vulgare Q96464_HORVU D 0.704
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.704
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.704
MDP0000179306 Malus domestica MDP0000179306 I 0.704
OBART01G34660 Oryza barthii OBART01G34660 I 0.704
Si000907m.g Setaria italica Si000907m.g I 0.704
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.704
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.704
OB01G43550 Oryza brachyantha OB01G43550 I 0.704
Solyc07g052300.2 Solanum lycopersicum Solyc07g052300.2 I 0.704
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.704
PGSC0003DMG400028949 Solanum tuberosum PGSC0003DMG400028949 I 0.704
myb.Ph3 Petunia x hybrida Q02994_PETHY D 0.704
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.704
GAM1 Oryza indica BGIOSGA004670 I 0.704
Cucsa.060080 Cucumis sativus Cucsa.060080 I 0.704
GAMYB Oryza sativa OS01G0812000 I 0.704
Cucsa.148580 Cucumis sativus Cucsa.148580 I 0.704
Cla007782 Citrullus lanatus Cla007782 I 0.704
Cla005406 Citrullus lanatus Cla005406 I 0.704
gene03321-v1.0-hybrid Fragaria vesca gene03321-v1.0-hybrid I 0.704
PRUPE_ppa019943mg Prunus persica PRUPE_ppa019943mg I 0.704
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.704
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.704
F775_28392 Aegilops tauschii F775_28392 I 0.704
gene03323-v1.0-hybrid Fragaria vesca gene03323-v1.0-hybrid I 0.704
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.704
PRUPE_ppa022465mg Prunus persica PRUPE_ppa022465mg I 0.704
Lus10035275.g Linum usitatissimum Lus10035275.g I 0.703
Q9FR42_TOBAC Nicotiana tabacum Q9FR42_TOBAC D 0.703
Lus10027189.g Linum usitatissimum Lus10027189.g I 0.703
gw1.238.44.1 Physcomitrella patens gw1.238.44.1 I 0.702
gw1.66.160.1 Physcomitrella patens gw1.66.160.1 I 0.702
Bra034842 Brassica rapa Bra034842 I 0.700
Bo5g136570 Brassica oleracea Bo5g136570 I 0.700
MDP0000175835 Malus domestica MDP0000175835 I 0.699
Bostr.23794s0867 Boechera stricta Bostr.23794s0867 I 0.699
TCM_041010 Theobroma cacao TCM_041010 I 0.699
SELMODRAFT_128781 Selaginella moellendorffii SELMODRAFT_128781 I 0.699
SELMODRAFT_81112 Selaginella moellendorffii SELMODRAFT_81112 I 0.699
orange1.1g039708m.g Citrus sinensis orange1.1g039708m.g I 0.699
Cagra.0352s0034 Capsella grandiflora Cagra.0352s0034 I 0.699
MYB101 Arabidopsis thaliana AT2G32460 D 0.699
SapurV1A.2567s0040 Salix purpurea SapurV1A.2567s0040 I 0.699
Bra021791 Brassica rapa Bra021791 I 0.699
Ciclev10014958m.g Citrus clementina Ciclev10014958m.g I 0.699
SapurV1A.1897s0070 Salix purpurea SapurV1A.1897s0070 I 0.699
Bo3g026690 Brassica oleracea Bo3g026690 I 0.699
SapurV1A.0014s1240 Salix purpurea SapurV1A.0014s1240 I 0.699
Carubv10025227m.g Capsella rubella Carubv10025227m.g I 0.699
Thhalv10016567m.g Eutrema salsugineum Thhalv10016567m.g I 0.699
MYB101 Arabidopsis lyrata fgenesh2_kg.4__1233__AT2G32460.2 I 0.699
MTR_3g052430 Medicago truncatula MTR_3g052430 I 0.698
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I 0.697
Thhalv10013018m.g Eutrema salsugineum Thhalv10013018m.g I 0.695
GLYMA13G25716 Glycine max GLYMA13G25716 I 0.695
ATMYB120 Arabidopsis thaliana AT5G55020 I 0.695
Cagra.1629s0073 Capsella grandiflora Cagra.1629s0073 I 0.695
Carubv10026070m.g Capsella rubella Carubv10026070m.g I 0.695
Gorai.006G121900 Gossypium raimondii Gorai.006G121900 I 0.695
Bostr.26833s0761 Boechera stricta Bostr.26833s0761 I 0.695
Ca_20081 Cicer arietinum Ca_20081 I 0.694
GLYMA18G10921 Glycine max GLYMA18G10921 I 0.694
BGIOSGA017818 Oryza indica BGIOSGA017818 I 0.694
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.694
OS05G0490600 Oryza sativa OS05G0490600 I 0.694
ORUFI05G22370 Oryza rufipogon ORUFI05G22370 I 0.694
OPUNC05G18800 Oryza punctata OPUNC05G18800 I 0.694
OGLUM05G22330 Oryza glumaepatula OGLUM05G22330 I 0.694
OBART05G21120 Oryza barthii OBART05G21120 I 0.694
Ca_15422 Cicer arietinum Ca_15422 I 0.693
mgf002965m Mimulus guttatus mgf002965m I 0.693
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.693
Ciclev10000756m.g Citrus clementina Ciclev10000756m.g I 0.693
orange1.1g011938m.g Citrus sinensis orange1.1g011938m.g I 0.693
Eucgr.G03183 Eucalyptus grandis Eucgr.G03183 I 0.693
MTR_3g052450 Medicago truncatula MTR_3g052450 I 0.693
Bo9g119060 Brassica oleracea Bo9g119060 I 0.692
Bra002938 Brassica rapa Bra002938 I 0.692
cassava40302.m1 Manihot esculenta cassava40302.m1 I 0.692
Carubv10013393m.g Capsella rubella Carubv10013393m.g I 0.691
Thhalv10020455m.g Eutrema salsugineum Thhalv10020455m.g I 0.691
Cagra.1655s0026 Capsella grandiflora Cagra.1655s0026 I 0.691
ATMYB65 Arabidopsis thaliana AT3G11440 D 0.691
Bostr.19424s1075 Boechera stricta Bostr.19424s1075 I 0.691
ATMYB65 Arabidopsis lyrata fgenesh2_kg.3__1182__AT3G11440.1 I 0.691
VIT_13s0067g01630 Vitis vinifera VIT_13s0067g01630 I 0.690
cassava30977.valid.m1 Manihot esculenta cassava30977.valid.m1 I 0.690
mgf025568m Mimulus guttatus mgf025568m I 0.690
cassava44767.m1 Manihot esculenta cassava44767.m1 I 0.690
Solyc06g073640.2 Solanum lycopersicum Solyc06g073640.2 I 0.690
29785.m000932 Ricinus communis 29785.m000932 I 0.690
PGSC0003DMG400005918 Solanum tuberosum PGSC0003DMG400005918 I 0.690
Cucsa.364400 Cucumis sativus Cucsa.364400 I 0.690
Ca_25013 Cicer arietinum Ca_25013 I 0.690
Bo4g178040 Brassica oleracea Bo4g178040 I 0.689
Ca_21739 Cicer arietinum Ca_21739 I 0.688
Lus10026787.g Linum usitatissimum Lus10026787.g I 0.686
Lus10036103.g Linum usitatissimum Lus10036103.g I 0.686
cassava11031.m1 Manihot esculenta cassava11031.m1 I 0.686
MTR_8g042410 Medicago truncatula MTR_8g042410 I 0.686
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.686
GLYMA08G42955 Glycine max GLYMA08G42955 I 0.685
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.684
Bra022888 Brassica rapa Bra022888 I 0.684
SapurV1A.1951s0020 Salix purpurea SapurV1A.1951s0020 I 0.684
Pm016605 Prunus mume Pm016605 I 0.684
OMERI06G21070 Oryza meridionalis OMERI06G21070 I 0.683
OLONG_019401 Oryza longistaminata OLONG_019401 I 0.683
OGLUM06G21530 Oryza glumaepatula OGLUM06G21530 I 0.683
OBART06G20450 Oryza barthii OBART06G20450 I 0.683
GLYMA08G42920 Glycine max GLYMA08G42920 I 0.683
ONIVA06G24230 Oryza nivara ONIVA06G24230 I 0.683
ORUFI06G21880 Oryza rufipogon ORUFI06G21880 I 0.683
OPUNC06G18670 Oryza punctata OPUNC06G18670 I 0.683
ORGLA06G0168900 Oryza glaberrima ORGLA06G0168900 I 0.683
Bostr.13129s0364 Boechera stricta Bostr.13129s0364 I 0.682
Thhalv10013329m.g Eutrema salsugineum Thhalv10013329m.g I 0.682
VIT_06s0009g02480 Vitis vinifera VIT_06s0009g02480 I 0.682
Carubv10000715m.g Capsella rubella Carubv10000715m.g I 0.682
Cagra.2117s0052 Capsella grandiflora Cagra.2117s0052 I 0.682
Gorai.010G212500 Gossypium raimondii Gorai.010G212500 I 0.681
SapurV1A.0008s0050 Salix purpurea SapurV1A.0008s0050 I 0.681
Lus10008685.g Linum usitatissimum Lus10008685.g I 0.681
Lus10026142.g Linum usitatissimum Lus10026142.g I 0.681
SapurV1A.0369s0230 Salix purpurea SapurV1A.0369s0230 I 0.681
SapurV1A.0537s0200 Salix purpurea SapurV1A.0537s0200 I 0.681
Gorai.012G022000 Gossypium raimondii Gorai.012G022000 I 0.681
TCM_044611 Theobroma cacao TCM_044611 I 0.681
29686.m000890 Ricinus communis 29686.m000890 I 0.681
POPTR_0003s18900 Populus trichocarpa POPTR_0003s18900 I 0.681
POPTR_0001s07330 Populus trichocarpa POPTR_0001s07330 I 0.681
cassava1461.valid.m1 Manihot esculenta cassava1461.valid.m1 I 0.681
POPTR_0009s02380 Populus trichocarpa POPTR_0009s02380 I 0.681
evm.TU.supercontig_34.210 Carica papaya evm.TU.supercontig_34.210 I 0.681
evm.TU.supercontig_33.151 Carica papaya evm.TU.supercontig_33.151 I 0.681
Aquca_014_00928 Aquilegia coerulea Aquca_014_00928 I 0.681
MYB101 Populus trichocarpa POPTR_0002s21300 I 0.680
MTR_1g021230 Medicago truncatula MTR_1g021230 I 0.680
MDP0000308617 Malus domestica MDP0000308617 I 0.680
Sb03g037680 Sorghum bicolor Sb03g037680 I 0.678
LPERR06G17110 Leersia perrieri LPERR06G17110 N 0.677
Gorai.009G301100 Gossypium raimondii Gorai.009G301100 I 0.677
MYB33 Arabidopsis lyrata fgenesh2_kg.6__546__AT5G06100.3 I 0.675
Bo4g076940 Brassica oleracea Bo4g076940 I 0.675
AMTR_s00038p00150140 Amborella trichopoda AMTR_s00038p00150140 I 0.675
ONIVA05G21800 Oryza nivara ONIVA05G21800 I 0.674
MTR_3g011610 Medicago truncatula MTR_3g011610 I 0.674
Bra012038 Brassica rapa Bra012038 I 0.672
Lus10021539.g Linum usitatissimum Lus10021539.g I 0.671
Lus10040063.g Linum usitatissimum Lus10040063.g I 0.671
LjT02G13.10.nc Lotus japonicus LjT02G13.10.nc I 0.670
PGSC0003DMG400027418 Solanum tuberosum PGSC0003DMG400027418 I 0.669
SELMODRAFT_38120 Selaginella moellendorffii SELMODRAFT_38120 I 0.669
TRIUR3_17275 Triticum urartu TRIUR3_17275 I 0.668
Traes_1BL_CF98E922B Triticum aestivum Traes_1BL_CF98E922B I 0.668
Bo3g021790 Brassica oleracea Bo3g021790 I 0.667
Bra028997 Brassica rapa Bra028997 I 0.667
Gorai.002G089900 Gossypium raimondii Gorai.002G089900 I 0.665
TCM_030853 Theobroma cacao TCM_030853 I 0.665
Pavir.Da00534 Panicum virgatum Pavir.Da00534 I 0.664
Si007070m.g Setaria italica Si007070m.g I 0.664
Sb10g023665 Sorghum bicolor Sb10g023665 I 0.664
MDP0000147309 Malus domestica MDP0000147309 I 0.663
GSMUA_AchrUn_randomG15100_001 Musa acuminata GSMUA_AchrUn_randomG15100_001 I 0.662
MYB33 Arabidopsis thaliana AT5G06100 D 0.662
GLYMA06G47000 Glycine max GLYMA06G47000 I 0.662