CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_102149.2
(
Lotus japonicus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
LjSGA_102149.2
T291009_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_102149.2
Myb
41
68
RLRWTTDLHERFVDAVTQLGGPSSKWFV
Links
Other
Myb/SANT
family TFs
Other
Lotus japonicus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC08G10730
Oryza punctata
OPUNC08G10730
N
0.842
Cla005572
Citrullus lanatus
Cla005572
N
0.765
evm.TU.supercontig_817.1
Carica papaya
evm.TU.supercontig_817.1
N
0.765
PGSC0003DMG400007401
Solanum tuberosum
PGSC0003DMG400007401
I
0.765
Pavir.Ba02286
Panicum virgatum
Pavir.Ba02286
N
0.765
PRUPE_ppa007491m2g
Prunus persica
PRUPE_ppa007491m2g
N
0.765
e_gw1.141.94.1
Physcomitrella patens
e_gw1.141.94.1
N
0.749
BGIOSGA028509
Oryza indica
BGIOSGA028509
N
0.746
orange1.1g038008m.g
Citrus sinensis
orange1.1g038008m.g
N
0.746
OS08G0346400
Oryza sativa
OS08G0346400
I
0.746
OGLUM08G12590
Oryza glumaepatula
OGLUM08G12590
I
0.746
Pavir.Fa01260
Panicum virgatum
Pavir.Fa01260
N
0.710
F775_22357
Aegilops tauschii
F775_22357
N
0.707
Bra034737
Brassica rapa
Bra034737
N
0.705
OLONG_004751
Oryza longistaminata
OLONG_004751
N
0.705
Carubv10012777m.g
Capsella rubella
Carubv10012777m.g
N
0.700
MLOC_63597
Hordeum vulgare
MLOC_63597
I
0.700
GRMZM2G133262
Zea mays
GRMZM2G133262
N
0.699
GRMZM2G162409
Zea mays
GRMZM2G162409
I
0.689
OBART01G08800
Oryza barthii
OBART01G08800
N
0.686
PGSC0003DMG400009304
Solanum tuberosum
PGSC0003DMG400009304
I
0.686
30005.m001245
Ricinus communis
30005.m001245
N
0.682
OPUNC02G34240
Oryza punctata
OPUNC02G34240
N
0.680
OMERI02G34900
Oryza meridionalis
OMERI02G34900
N
0.680
PRUPE_ppa025217mg
Prunus persica
PRUPE_ppa025217mg
N
0.669