LjT05A08.60.nd (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 LjT05A08.60.nd T291028_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.836 0.892
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.836 0.892
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT05A08.60.nd Myb 14 62
LjT05A08.60.nd Myb 68 113

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

466 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MECOM Homo sapiens ENSG00000085276 D 0.000
Mecom Mus musculus ENSMUSG00000027684 D 0.000
ENSXMAG00000010745 Xiphophorus maculatus ENSXMAG00000010745 I 0.000
MECOM Tursiops truncatus ENSTTRG00000002158 I 0.000
ENSTGUG00000011015 Taeniopygia guttata ENSTGUG00000011015 I 0.000
ENSSHAG00000017530 Sarcophilus harrisii ENSSHAG00000017530 I 0.000
Mecom Rattus norvegicus ENSRNOG00000012645 I 0.000
MECOM Pan troglodytes ENSPTRG00000015601 I 0.000
ENSPSIG00000004908 Pelodiscus sinensis ENSPSIG00000004908 I 0.000
ENSPPYG00000014277 Pongo abelii ENSPPYG00000014277 I 0.000
ENSPFOG00000011975 Poecilia formosa ENSPFOG00000011975 I 0.000
ENSPANG00000001637 Papio anubis ENSPANG00000001637 I 0.000
Aan_R014069 Calypte anna Aan_R014069 I 0.000
Afo_R003945 Aptenodytes forsteri Afo_R003945 I 0.000
Brh_R009954 Buceros rhinoceros Brh_R009954 I 0.000
mecom.L Xenopus laevis XB-GENE-980198 I 0.000
mecom.S Xenopus laevis XB-GENE-6448217 I 0.000
B7ZRU9 Xenopus laevis B7ZRU9 I 0.000
B7ZRM8 Xenopus laevis B7ZRM8 I 0.000
Tal_R005471 Tyto alba Tal_R005471 I 0.000
Pvit_19180 Pogona vitticeps Pvit_19180 I 0.000
Myotis_brandtii_MECOM_10024770 Myotis brandtii Myotis_brandtii_MECOM_10024770 I 0.000
Gfo_R004540 Geospiza fortis Gfo_R004540 I 0.000
ENSP00000417899-D1 Bos grunniens ENSP00000417899-D1 I 0.000
ENSMMUP00000002995 Macaca fascicularis ENSMMUP00000002995 I 0.000
Cmyd_10009299 Chelonia mydas Cmyd_10009299 I 0.000
MECOM Otolemur garnettii ENSOGAG00000012812 I 0.000
MECOM Oryctolagus cuniculus ENSOCUG00000010171 I 0.000
MECOM Felis catus ENSFCAG00000012665 I 0.000
ENSFALG00000008636 Ficedula albicollis ENSFALG00000008636 I 0.000
MECOM Equus caballus ENSECAG00000020788 I 0.000
MECOM Dasypus novemcinctus ENSDNOG00000007746 I 0.000
ENSCSAG00000012539 Chlorocebus sabaeus ENSCSAG00000012539 I 0.000
MECOM Cavia porcellus ENSCPOG00000013572 I 0.000
MECOM Callithrix jacchus ENSCJAG00000002651 I 0.000
MECOM Canis familiaris ENSCAFG00000014621 I 0.000
MECOM Bos taurus ENSBTAG00000005871 I 0.000
ENSAPLG00000012134 Anas platyrhynchos ENSAPLG00000012134 I 0.000
MECOM Anolis carolinensis ENSACAG00000015620 I 0.000
ENSGALG00000009437 Gallus gallus ENSGALG00000009437 I 0.000
MECOM Gorilla gorilla ENSGGOG00000013086 I 0.000
ENSOARG00000000899 Ovis aries ENSOARG00000000899 I 0.000
MECOM Ornithorhynchus anatinus ENSOANG00000007585 I 0.000
ENSNLEG00000004964 Nomascus leucogenys ENSNLEG00000004964 I 0.000
ENSMPUG00000017083 Mustela putorius furo ENSMPUG00000017083 I 0.000
MECOM Monodelphis domestica ENSMODG00000016133 I 0.000
MECOM Macaca mulatta ENSMMUG00000002242 I 0.000
MECOM Meleagris gallopavo ENSMGAG00000010302 I 0.000
ENSLOCG00000009557 Lepisosteus oculatus ENSLOCG00000009557 I 0.000
MECOM Loxodonta africana ENSLAFG00000011479 I 0.000
ENSLACG00000017233 Latimeria chalumnae ENSLACG00000017233 I 0.000
ENSAMEG00000002052 Ailuropoda melanoleuca ENSAMEG00000002052 I 0.000