PDK_20s1306201g001 (Phoenix dactylifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PDK_20s1306201g001 T291084_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB96
M07153_2.00
Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN

NDNWRDTRGTTGGDDRDDDDD
Dap-seq
OMalley et al.(2016)
MYB96_colamp_a
0.688 0.892
MYB96
M07154_2.00
Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH

DDDDDTDGKTGGNDGKTR
Dap-seq
OMalley et al.(2016)
MYB96_col_b
0.688 0.892
MYB94
M02298_2.00
Arabidopsis thaliana
DACCGGTH

DACCGGTH
PBM
Weirauch et al.(2014)
pTH7085
0.683 0.880
MYB30
M07089_2.00
Arabidopsis thaliana
NHHHCAACYACYWHH

DDWRGTRGTTGDDDN
Dap-seq
OMalley et al.(2016)
MYB30_col_a
0.683 0.880
MYB30
M07090_2.00
Arabidopsis thaliana
HHHYYHCCAACYAMY

RKTRGTTGGDRRDDD
Dap-seq
OMalley et al.(2016)
MYB30_colamp_a
0.683 0.880
MYB94
M07094_2.00
Arabidopsis thaliana
HHNYHYCAACYACYWHHNN

NNDDWRGTRGTTGRDRNDD
Dap-seq
OMalley et al.(2016)
MYB94_col_b
0.683 0.880
MYB60
M07001_2.00
Arabidopsis thaliana
HNNHYYCAACYACYWHHNN

NNDDWRGTRGTTGRRDNND
Dap-seq
OMalley et al.(2016)
MYB60_col
0.669 0.855
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1306201g001 Myb 14 61
PDK_20s1306201g001 Myb 67 102

Links

Other Myb/SANT family TFs
Other Phoenix dactylifera TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_Achr8G16920_001 Musa acuminata GSMUA_Achr8G16920_001 N 0.810
F775_21295 Aegilops tauschii F775_21295 N 0.752
TRIUR3_21190 Triticum urartu TRIUR3_21190 N 0.741
MLOC_34885 Hordeum vulgare MLOC_34885 I 0.741
GSMUA_Achr6G10700_001 Musa acuminata GSMUA_Achr6G10700_001 I 0.727
F775_18838 Aegilops tauschii F775_18838 N 0.724
Eucgr.J01343 Eucalyptus grandis Eucgr.J01343 I 0.712
Cla018893 Citrullus lanatus Cla018893 I 0.703
VIT_17s0000g06190 Vitis vinifera VIT_17s0000g06190 I 0.703
MTR_3g039990 Medicago truncatula MTR_3g039990 I 0.703
Pm024912 Prunus mume Pm024912 I 0.703
POPTR_0017s11880 Populus trichocarpa POPTR_0017s11880 I 0.703
Cucsa.112760 Cucumis sativus Cucsa.112760 I 0.703
orange1.1g019307m.g Citrus sinensis orange1.1g019307m.g I 0.703
SapurV1A.0300s0080 Salix purpurea SapurV1A.0300s0080 I 0.703
SapurV1A.0849s0010 Salix purpurea SapurV1A.0849s0010 I 0.703
MDP0000149535 Malus domestica MDP0000149535 I 0.703
gene03817-v1.0-hybrid Fragaria vesca gene03817-v1.0-hybrid I 0.703
Aquca_002_00594 Aquilegia coerulea Aquca_002_00594 I 0.703
Ciclev10012152m.g Citrus clementina Ciclev10012152m.g I 0.703
Ciclev10020967m.g Citrus clementina Ciclev10020967m.g I 0.703
cassava31787.valid.m1 Manihot esculenta cassava31787.valid.m1 I 0.703
PRUPE_ppa007562mg Prunus persica PRUPE_ppa007562mg I 0.703
30138.m004082 Ricinus communis 30138.m004082 I 0.700
GLYMA04G33720 Glycine max GLYMA04G33720 I 0.697
MDP0000149102 Malus domestica MDP0000149102 I 0.697
Gorai.006G017400 Gossypium raimondii Gorai.006G017400 I 0.697
gene26007-v1.0-hybrid Fragaria vesca gene26007-v1.0-hybrid I 0.697
Pm015880 Prunus mume Pm015880 I 0.697
MDP0000219359 Malus domestica MDP0000219359 I 0.697
GSMUA_Achr8G01400_001 Musa acuminata GSMUA_Achr8G01400_001 I 0.697
GLYMA06G20800 Glycine max GLYMA06G20800 I 0.697
chr1.CM0023.70.nc Lotus japonicus chr1.CM0023.70.nc I 0.697
PK20858.1 Cannabis sativa PK20858.1 I 0.697
ATMYB30 Vitis vinifera VIT_14s0108g00830 I 0.694
OB09G16780 Oryza brachyantha OB09G16780 I 0.694
GLYMA18G49360 Glycine max GLYMA18G49360 I 0.693
GLYMA09G37340 Glycine max GLYMA09G37340 I 0.693
Ca_10518 Cicer arietinum Ca_10518 I 0.692
Bo9g014980 Brassica oleracea Bo9g014980 I 0.692
MTR_6g012180 Medicago truncatula MTR_6g012180 I 0.692
OB07G28650 Oryza brachyantha OB07G28650 I 0.691
mg015532m Mimulus guttatus mg015532m I 0.691
LPERR09G07060 Leersia perrieri LPERR09G07060 I 0.691
BRADI3G37047 Brachypodium distachyon BRADI3G37047 I 0.691
BRADI4G30220 Brachypodium distachyon BRADI4G30220 I 0.691
Pavir.Bb03412 Panicum virgatum Pavir.Bb03412 I 0.691
Si030560m.g Setaria italica Si030560m.g I 0.691
F775_25655 Aegilops tauschii F775_25655 I 0.691
Traes_5BL_632EBAD09 Triticum aestivum Traes_5BL_632EBAD09 I 0.691
GLYMA19G02600 Glycine max GLYMA19G02600 I 0.691
LPERR07G20060 Leersia perrieri LPERR07G20060 I 0.691
Traes_5DL_1D036F8B5 Triticum aestivum Traes_5DL_1D036F8B5 I 0.691
Sb02g040160 Sorghum bicolor Sb02g040160 I 0.690
Bo5g009290 Brassica oleracea Bo5g009290 I 0.689
Ca_24550 Cicer arietinum Ca_24550 I 0.689
MTR_7g010210 Medicago truncatula MTR_7g010210 I 0.689
MYB96 Arabidopsis thaliana AT5G62470 D 0.688
MYB96 Arabidopsis lyrata fgenesh2_kg.8__2239__AT5G62470.1 I 0.688
POPTR_0004s12530 Populus trichocarpa POPTR_0004s12530 I 0.686
PGSC0003DMG400033043 Solanum tuberosum PGSC0003DMG400033043 I 0.686
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I 0.686
AMTR_s00010p00261750 Amborella trichopoda AMTR_s00010p00261750 I 0.686
Lus10024218.g Linum usitatissimum Lus10024218.g I 0.686
Lus10002056.g Linum usitatissimum Lus10002056.g I 0.686
Gorai.007G037100 Gossypium raimondii Gorai.007G037100 I 0.686
Gorai.008G192900 Gossypium raimondii Gorai.008G192900 I 0.686
TCM_018538 Theobroma cacao TCM_018538 I 0.686
Solyc06g069850.2 Solanum lycopersicum Solyc06g069850.2 I 0.686
cassava17529.valid.m1 Manihot esculenta cassava17529.valid.m1 I 0.686
TCM_013983 Theobroma cacao TCM_013983 I 0.686
LPERR03G16640 Leersia perrieri LPERR03G16640 I 0.686
GSMUA_Achr7G21010_001 Musa acuminata GSMUA_Achr7G21010_001 I 0.685
cassava38120.valid.m1 Manihot esculenta cassava38120.valid.m1 I 0.684
Carubv10026666m.g Capsella rubella Carubv10026666m.g I 0.683
Carubv10017640m.g Capsella rubella Carubv10017640m.g I 0.683
Cagra.4003s0035 Capsella grandiflora Cagra.4003s0035 I 0.683
Carubv10017612m.g Capsella rubella Carubv10017612m.g I 0.683
MYB94 Arabidopsis lyrata scaffold_501696.1 I 0.683
GLYMA13G05370 Glycine max GLYMA13G05370 I 0.683
Bo7g087050 Brassica oleracea Bo7g087050 I 0.683
Bo2g146540 Brassica oleracea Bo2g146540 I 0.683
Cagra.3206s0001 Capsella grandiflora Cagra.3206s0001 I 0.683
Bostr.18473s0197 Boechera stricta Bostr.18473s0197 I 0.683
Bo1g090540 Brassica oleracea Bo1g090540 I 0.683
Bo2g164160 Brassica oleracea Bo2g164160 I 0.683
Bra010085 Brassica rapa Bra010085 I 0.683
Bo3g107600 Brassica oleracea Bo3g107600 I 0.683
Bostr.0556s0539 Boechera stricta Bostr.0556s0539 I 0.683
Bo9g008700 Brassica oleracea Bo9g008700 I 0.683
ATMYB30 Arabidopsis lyrata fgenesh2_kg.5__652__AT3G28910.1 I 0.683
Bostr.0568s0561 Boechera stricta Bostr.0568s0561 I 0.683
Cagra.1659s0003 Capsella grandiflora Cagra.1659s0003 I 0.683
AC165178.2_FG004 Zea mays AC165178.2_FG004 I 0.683
Bra039040 Brassica rapa Bra039040 I 0.683
Bra025361 Brassica rapa Bra025361 I 0.683
Pavir.Bb02186 Panicum virgatum Pavir.Bb02186 I 0.683
MYB30 Arabidopsis thaliana AT3G28910 D 0.683
Thhalv10004487m.g Eutrema salsugineum Thhalv10004487m.g I 0.683
Thhalv10004538m.g Eutrema salsugineum Thhalv10004538m.g I 0.683
Bra033067 Brassica rapa Bra033067 I 0.683
Bra035893 Brassica rapa Bra035893 I 0.683
Thhalv10010525m.g Eutrema salsugineum Thhalv10010525m.g I 0.683
orange1.1g018746m.g Citrus sinensis orange1.1g018746m.g I 0.683
Pavir.Ba01835 Panicum virgatum Pavir.Ba01835 I 0.683
MYB94 Arabidopsis thaliana AT3G47600 D 0.683
MLOC_62516 Hordeum vulgare MLOC_62516 I 0.680
OS08G0437300 Oryza sativa OS08G0437300 I 0.680
OGLUM07G23120 Oryza glumaepatula OGLUM07G23120 I 0.680
OMERI07G19460 Oryza meridionalis OMERI07G19460 I 0.680
ONIVA07G22680 Oryza nivara ONIVA07G22680 I 0.680
ORGLA07G0180600 Oryza glaberrima ORGLA07G0180600 I 0.680
BGIOSGA028730 Oryza indica BGIOSGA028730 I 0.680
BGIOSGA028729 Oryza indica BGIOSGA028729 I 0.680
OS07G0629000 Oryza sativa OS07G0629000 I 0.680
ORUFI07G24230 Oryza rufipogon ORUFI07G24230 I 0.680
GLYMA05G01080 Glycine max GLYMA05G01080 I 0.680
BGIOSGA023865 Oryza indica BGIOSGA023865 I 0.680
cassava42727.valid.m1 Manihot esculenta cassava42727.valid.m1 I 0.678
OPUNC03G18230 Oryza punctata OPUNC03G18230 I 0.678
GRMZM2G056407 Zea mays GRMZM2G056407 I 0.678
Cla010500 Citrullus lanatus Cla010500 I 0.678
29818.m000395 Ricinus communis 29818.m000395 I 0.677
Lus10015369.g Linum usitatissimum Lus10015369.g I 0.675
F775_22368 Aegilops tauschii F775_22368 N 0.675
OB08G23440 Oryza brachyantha OB08G23440 I 0.674
PRUPE_ppa008366mg Prunus persica PRUPE_ppa008366mg I 0.673
MDP0000144744 Malus domestica MDP0000144744 I 0.673
GSMUA_Achr3G09450_001 Musa acuminata GSMUA_Achr3G09450_001 I 0.671
Eucgr.B00502 Eucalyptus grandis Eucgr.B00502 I 0.670
GLYMA19G24531 Glycine max GLYMA19G24531 N 0.670
GSMUA_Achr2G22010_001 Musa acuminata GSMUA_Achr2G22010_001 I 0.670
Ca_18699 Cicer arietinum Ca_18699 I 0.670
Eucgr.K01545 Eucalyptus grandis Eucgr.K01545 I 0.669
Pm025436 Prunus mume Pm025436 I 0.669
MYB60 Arabidopsis lyrata scaffold_100910.1 I 0.669
Ciclev10031946m.g Citrus clementina Ciclev10031946m.g I 0.669
Bra030743 Brassica rapa Bra030743 I 0.669
PRUPE_ppa023776mg Prunus persica PRUPE_ppa023776mg I 0.669
Bo8g058040 Brassica oleracea Bo8g058040 I 0.669
SapurV1A.0876s0040 Salix purpurea SapurV1A.0876s0040 I 0.669
Thhalv10008426m.g Eutrema salsugineum Thhalv10008426m.g I 0.669
MYB60 Arabidopsis thaliana AT1G08810 D 0.669
orange1.1g018559m.g Citrus sinensis orange1.1g018559m.g I 0.669
TCM_025795 Theobroma cacao TCM_025795 I 0.669
POPTR_0013s06390 Populus trichocarpa POPTR_0013s06390 I 0.669
evm.TU.supercontig_73.13 Carica papaya evm.TU.supercontig_73.13 I 0.669
cassava15268.m1 Manihot esculenta cassava15268.m1 I 0.669
OB03G28590 Oryza brachyantha OB03G28590 I 0.669
cassava25941.m1 Manihot esculenta cassava25941.m1 I 0.669
MYB60 Vitis vinifera VIT_08s0056g00800 I 0.669
OGLUM12G01990 Oryza glumaepatula OGLUM12G01990 I 0.668
BRADI4G43937 Brachypodium distachyon BRADI4G43937 I 0.668
TRIUR3_20609 Triticum urartu TRIUR3_20609 I 0.668
OBART07G20460 Oryza barthii OBART07G20460 I 0.668
OBART12G01420 Oryza barthii OBART12G01420 I 0.668
GSMUA_AchrUn_randomG02160_001 Musa acuminata GSMUA_AchrUn_randomG02160_001 I 0.668
OS12G0125000 Oryza sativa OS12G0125000 I 0.668
ORUFI12G01670 Oryza rufipogon ORUFI12G01670 I 0.668
ORGLA12G0012300 Oryza glaberrima ORGLA12G0012300 I 0.668
OPUNC12G01500 Oryza punctata OPUNC12G01500 I 0.668
OMERI12G00580 Oryza meridionalis OMERI12G00580 I 0.668
Pavir.J27229 Panicum virgatum Pavir.J27229 I 0.668
OS11G0128500 Oryza sativa OS11G0128500 I 0.668
Pavir.J27570 Panicum virgatum Pavir.J27570 I 0.668
OPUNC11G01450 Oryza punctata OPUNC11G01450 I 0.668
BGIOSGA036717 Oryza indica BGIOSGA036717 I 0.668
OB12G11580 Oryza brachyantha OB12G11580 I 0.668
MLOC_68511 Hordeum vulgare MLOC_68511 I 0.668
OB11G11290 Oryza brachyantha OB11G11290 I 0.668
Traes_5BL_557E7700B Triticum aestivum Traes_5BL_557E7700B I 0.668
Traes_5DL_36CD3229A Triticum aestivum Traes_5DL_36CD3229A I 0.668
LPERR12G01520 Leersia perrieri LPERR12G01520 I 0.668
Si026651m.g Setaria italica Si026651m.g I 0.668
MLOC_72230 Hordeum vulgare MLOC_72230 I 0.668
Si010608m.g Setaria italica Si010608m.g I 0.668
GRMZM2G162434 Zea mays GRMZM2G162434 I 0.668
BGIOSGA034582 Oryza indica BGIOSGA034582 I 0.668
Sb05g001730 Sorghum bicolor Sb05g001730 I 0.668
evm.TU.supercontig_111.6 Carica papaya evm.TU.supercontig_111.6 I 0.667
Aquca_014_00947 Aquilegia coerulea Aquca_014_00947 I 0.666
mgf025699m Mimulus guttatus mgf025699m I 0.665
MTR_0140s0030 Medicago truncatula MTR_0140s0030 I 0.664
MTR_0489s0020 Medicago truncatula MTR_0489s0020 I 0.664
PK07857.1 Cannabis sativa PK07857.1 I 0.663
GSMUA_Achr9G17050_001 Musa acuminata GSMUA_Achr9G17050_001 I 0.663
MTR_7g087130 Medicago truncatula MTR_7g087130 I 0.663
GLYMA03G00890 Glycine max GLYMA03G00890 I 0.663
Carubv10009957m.g Capsella rubella Carubv10009957m.g I 0.663
Solyc10g081490.1 Solanum lycopersicum Solyc10g081490.1 I 0.663
Cagra.4395s0068 Capsella grandiflora Cagra.4395s0068 I 0.663
Aquca_009_00018 Aquilegia coerulea Aquca_009_00018 I 0.663
Bostr.25219s0065 Boechera stricta Bostr.25219s0065 I 0.663
GLYMA19G29750 Glycine max GLYMA19G29750 I 0.663
Gorai.013G196800 Gossypium raimondii Gorai.013G196800 I 0.663
MDP0000163673 Malus domestica MDP0000163673 I 0.663
MDP0000168550 Malus domestica MDP0000168550 I 0.663
PGSC0003DMG400006930 Solanum tuberosum PGSC0003DMG400006930 I 0.663
PGSC0003DMG400028125 Solanum tuberosum PGSC0003DMG400028125 I 0.663
Bra018598 Brassica rapa Bra018598 I 0.663
Ca_08170 Cicer arietinum Ca_08170 I 0.663
Gorai.012G054500 Gossypium raimondii Gorai.012G054500 I 0.661