CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1306201g001
(
Phoenix dactylifera
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PDK_20s1306201g001
T291084_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB96
M07153_2.00
Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN
NDNWRDTRGTTGGDDRDDDDD
Dap-seq
OMalley et al.(2016)
MYB96_colamp_a
0.688
0.892
MYB96
M07154_2.00
Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH
DDDDDTDGKTGGNDGKTR
Dap-seq
OMalley et al.(2016)
MYB96_col_b
0.688
0.892
MYB94
M02298_2.00
Arabidopsis thaliana
DACCGGTH
DACCGGTH
PBM
Weirauch et al.(2014)
pTH7085
0.683
0.880
MYB30
M07089_2.00
Arabidopsis thaliana
NHHHCAACYACYWHH
DDWRGTRGTTGDDDN
Dap-seq
OMalley et al.(2016)
MYB30_col_a
0.683
0.880
MYB30
M07090_2.00
Arabidopsis thaliana
HHHYYHCCAACYAMY
RKTRGTTGGDRRDDD
Dap-seq
OMalley et al.(2016)
MYB30_colamp_a
0.683
0.880
MYB94
M07094_2.00
Arabidopsis thaliana
HHNYHYCAACYACYWHHNN
NNDDWRGTRGTTGRDRNDD
Dap-seq
OMalley et al.(2016)
MYB94_col_b
0.683
0.880
MYB60
M07001_2.00
Arabidopsis thaliana
HNNHYYCAACYACYWHHNN
NNDDWRGTRGTTGRRDNND
Dap-seq
OMalley et al.(2016)
MYB60_col
0.669
0.855
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1306201g001
Myb
14
61
KGPWTPEEDIILVSYIQEHGPGNWRAVPAKTGLLRCSKSCRLRWTNYL
PDK_20s1306201g001
Myb
67
102
RGNFTDQEEKLIIHLQALLGNRWAAIASYLPERTKK
Links
Other
Myb/SANT
family TFs
Other
Phoenix dactylifera
TFs
202 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr8G16920_001
Musa acuminata
GSMUA_Achr8G16920_001
N
0.810
F775_21295
Aegilops tauschii
F775_21295
N
0.752
TRIUR3_21190
Triticum urartu
TRIUR3_21190
N
0.741
MLOC_34885
Hordeum vulgare
MLOC_34885
I
0.741
GSMUA_Achr6G10700_001
Musa acuminata
GSMUA_Achr6G10700_001
I
0.727
F775_18838
Aegilops tauschii
F775_18838
N
0.724
Eucgr.J01343
Eucalyptus grandis
Eucgr.J01343
I
0.712
Cla018893
Citrullus lanatus
Cla018893
I
0.703
VIT_17s0000g06190
Vitis vinifera
VIT_17s0000g06190
I
0.703
MTR_3g039990
Medicago truncatula
MTR_3g039990
I
0.703
Pm024912
Prunus mume
Pm024912
I
0.703
POPTR_0017s11880
Populus trichocarpa
POPTR_0017s11880
I
0.703
Cucsa.112760
Cucumis sativus
Cucsa.112760
I
0.703
orange1.1g019307m.g
Citrus sinensis
orange1.1g019307m.g
I
0.703
SapurV1A.0300s0080
Salix purpurea
SapurV1A.0300s0080
I
0.703
SapurV1A.0849s0010
Salix purpurea
SapurV1A.0849s0010
I
0.703
MDP0000149535
Malus domestica
MDP0000149535
I
0.703
gene03817-v1.0-hybrid
Fragaria vesca
gene03817-v1.0-hybrid
I
0.703
Aquca_002_00594
Aquilegia coerulea
Aquca_002_00594
I
0.703
Ciclev10012152m.g
Citrus clementina
Ciclev10012152m.g
I
0.703
Ciclev10020967m.g
Citrus clementina
Ciclev10020967m.g
I
0.703
cassava31787.valid.m1
Manihot esculenta
cassava31787.valid.m1
I
0.703
PRUPE_ppa007562mg
Prunus persica
PRUPE_ppa007562mg
I
0.703
30138.m004082
Ricinus communis
30138.m004082
I
0.700
GLYMA04G33720
Glycine max
GLYMA04G33720
I
0.697
MDP0000149102
Malus domestica
MDP0000149102
I
0.697
Gorai.006G017400
Gossypium raimondii
Gorai.006G017400
I
0.697
gene26007-v1.0-hybrid
Fragaria vesca
gene26007-v1.0-hybrid
I
0.697
Pm015880
Prunus mume
Pm015880
I
0.697
MDP0000219359
Malus domestica
MDP0000219359
I
0.697
GSMUA_Achr8G01400_001
Musa acuminata
GSMUA_Achr8G01400_001
I
0.697
GLYMA06G20800
Glycine max
GLYMA06G20800
I
0.697
chr1.CM0023.70.nc
Lotus japonicus
chr1.CM0023.70.nc
I
0.697
PK20858.1
Cannabis sativa
PK20858.1
I
0.697
ATMYB30
Vitis vinifera
VIT_14s0108g00830
I
0.694
OB09G16780
Oryza brachyantha
OB09G16780
I
0.694
GLYMA18G49360
Glycine max
GLYMA18G49360
I
0.693
GLYMA09G37340
Glycine max
GLYMA09G37340
I
0.693
Ca_10518
Cicer arietinum
Ca_10518
I
0.692
Bo9g014980
Brassica oleracea
Bo9g014980
I
0.692
MTR_6g012180
Medicago truncatula
MTR_6g012180
I
0.692
OB07G28650
Oryza brachyantha
OB07G28650
I
0.691
mg015532m
Mimulus guttatus
mg015532m
I
0.691
LPERR09G07060
Leersia perrieri
LPERR09G07060
I
0.691
BRADI3G37047
Brachypodium distachyon
BRADI3G37047
I
0.691
BRADI4G30220
Brachypodium distachyon
BRADI4G30220
I
0.691
Pavir.Bb03412
Panicum virgatum
Pavir.Bb03412
I
0.691
Si030560m.g
Setaria italica
Si030560m.g
I
0.691
F775_25655
Aegilops tauschii
F775_25655
I
0.691
Traes_5BL_632EBAD09
Triticum aestivum
Traes_5BL_632EBAD09
I
0.691
GLYMA19G02600
Glycine max
GLYMA19G02600
I
0.691
LPERR07G20060
Leersia perrieri
LPERR07G20060
I
0.691
Traes_5DL_1D036F8B5
Triticum aestivum
Traes_5DL_1D036F8B5
I
0.691
Sb02g040160
Sorghum bicolor
Sb02g040160
I
0.690
Bo5g009290
Brassica oleracea
Bo5g009290
I
0.689
Ca_24550
Cicer arietinum
Ca_24550
I
0.689
MTR_7g010210
Medicago truncatula
MTR_7g010210
I
0.689
MYB96
Arabidopsis thaliana
AT5G62470
D
0.688
MYB96
Arabidopsis lyrata
fgenesh2_kg.8__2239__AT5G62470.1
I
0.688
POPTR_0004s12530
Populus trichocarpa
POPTR_0004s12530
I
0.686
PGSC0003DMG400033043
Solanum tuberosum
PGSC0003DMG400033043
I
0.686
SapurV1A.0552s0030
Salix purpurea
SapurV1A.0552s0030
I
0.686
AMTR_s00010p00261750
Amborella trichopoda
AMTR_s00010p00261750
I
0.686
Lus10024218.g
Linum usitatissimum
Lus10024218.g
I
0.686
Lus10002056.g
Linum usitatissimum
Lus10002056.g
I
0.686
Gorai.007G037100
Gossypium raimondii
Gorai.007G037100
I
0.686
Gorai.008G192900
Gossypium raimondii
Gorai.008G192900
I
0.686
TCM_018538
Theobroma cacao
TCM_018538
I
0.686
Solyc06g069850.2
Solanum lycopersicum
Solyc06g069850.2
I
0.686
cassava17529.valid.m1
Manihot esculenta
cassava17529.valid.m1
I
0.686
TCM_013983
Theobroma cacao
TCM_013983
I
0.686
LPERR03G16640
Leersia perrieri
LPERR03G16640
I
0.686
GSMUA_Achr7G21010_001
Musa acuminata
GSMUA_Achr7G21010_001
I
0.685
cassava38120.valid.m1
Manihot esculenta
cassava38120.valid.m1
I
0.684
Carubv10026666m.g
Capsella rubella
Carubv10026666m.g
I
0.683
Carubv10017640m.g
Capsella rubella
Carubv10017640m.g
I
0.683
Cagra.4003s0035
Capsella grandiflora
Cagra.4003s0035
I
0.683
Carubv10017612m.g
Capsella rubella
Carubv10017612m.g
I
0.683
MYB94
Arabidopsis lyrata
scaffold_501696.1
I
0.683
GLYMA13G05370
Glycine max
GLYMA13G05370
I
0.683
Bo7g087050
Brassica oleracea
Bo7g087050
I
0.683
Bo2g146540
Brassica oleracea
Bo2g146540
I
0.683
Cagra.3206s0001
Capsella grandiflora
Cagra.3206s0001
I
0.683
Bostr.18473s0197
Boechera stricta
Bostr.18473s0197
I
0.683
Bo1g090540
Brassica oleracea
Bo1g090540
I
0.683
Bo2g164160
Brassica oleracea
Bo2g164160
I
0.683
Bra010085
Brassica rapa
Bra010085
I
0.683
Bo3g107600
Brassica oleracea
Bo3g107600
I
0.683
Bostr.0556s0539
Boechera stricta
Bostr.0556s0539
I
0.683
Bo9g008700
Brassica oleracea
Bo9g008700
I
0.683
ATMYB30
Arabidopsis lyrata
fgenesh2_kg.5__652__AT3G28910.1
I
0.683
Bostr.0568s0561
Boechera stricta
Bostr.0568s0561
I
0.683
Cagra.1659s0003
Capsella grandiflora
Cagra.1659s0003
I
0.683
AC165178.2_FG004
Zea mays
AC165178.2_FG004
I
0.683
Bra039040
Brassica rapa
Bra039040
I
0.683
Bra025361
Brassica rapa
Bra025361
I
0.683
Pavir.Bb02186
Panicum virgatum
Pavir.Bb02186
I
0.683
MYB30
Arabidopsis thaliana
AT3G28910
D
0.683
Thhalv10004487m.g
Eutrema salsugineum
Thhalv10004487m.g
I
0.683
Thhalv10004538m.g
Eutrema salsugineum
Thhalv10004538m.g
I
0.683
Bra033067
Brassica rapa
Bra033067
I
0.683
Bra035893
Brassica rapa
Bra035893
I
0.683
Thhalv10010525m.g
Eutrema salsugineum
Thhalv10010525m.g
I
0.683
orange1.1g018746m.g
Citrus sinensis
orange1.1g018746m.g
I
0.683
Pavir.Ba01835
Panicum virgatum
Pavir.Ba01835
I
0.683
MYB94
Arabidopsis thaliana
AT3G47600
D
0.683
MLOC_62516
Hordeum vulgare
MLOC_62516
I
0.680
OS08G0437300
Oryza sativa
OS08G0437300
I
0.680
OGLUM07G23120
Oryza glumaepatula
OGLUM07G23120
I
0.680
OMERI07G19460
Oryza meridionalis
OMERI07G19460
I
0.680
ONIVA07G22680
Oryza nivara
ONIVA07G22680
I
0.680
ORGLA07G0180600
Oryza glaberrima
ORGLA07G0180600
I
0.680
BGIOSGA028730
Oryza indica
BGIOSGA028730
I
0.680
BGIOSGA028729
Oryza indica
BGIOSGA028729
I
0.680
OS07G0629000
Oryza sativa
OS07G0629000
I
0.680
ORUFI07G24230
Oryza rufipogon
ORUFI07G24230
I
0.680
GLYMA05G01080
Glycine max
GLYMA05G01080
I
0.680
BGIOSGA023865
Oryza indica
BGIOSGA023865
I
0.680
cassava42727.valid.m1
Manihot esculenta
cassava42727.valid.m1
I
0.678
OPUNC03G18230
Oryza punctata
OPUNC03G18230
I
0.678
GRMZM2G056407
Zea mays
GRMZM2G056407
I
0.678
Cla010500
Citrullus lanatus
Cla010500
I
0.678
29818.m000395
Ricinus communis
29818.m000395
I
0.677
Lus10015369.g
Linum usitatissimum
Lus10015369.g
I
0.675
F775_22368
Aegilops tauschii
F775_22368
N
0.675
OB08G23440
Oryza brachyantha
OB08G23440
I
0.674
PRUPE_ppa008366mg
Prunus persica
PRUPE_ppa008366mg
I
0.673
MDP0000144744
Malus domestica
MDP0000144744
I
0.673
GSMUA_Achr3G09450_001
Musa acuminata
GSMUA_Achr3G09450_001
I
0.671
Eucgr.B00502
Eucalyptus grandis
Eucgr.B00502
I
0.670
GLYMA19G24531
Glycine max
GLYMA19G24531
N
0.670
GSMUA_Achr2G22010_001
Musa acuminata
GSMUA_Achr2G22010_001
I
0.670
Ca_18699
Cicer arietinum
Ca_18699
I
0.670
Eucgr.K01545
Eucalyptus grandis
Eucgr.K01545
I
0.669
Pm025436
Prunus mume
Pm025436
I
0.669
MYB60
Arabidopsis lyrata
scaffold_100910.1
I
0.669
Ciclev10031946m.g
Citrus clementina
Ciclev10031946m.g
I
0.669
Bra030743
Brassica rapa
Bra030743
I
0.669
PRUPE_ppa023776mg
Prunus persica
PRUPE_ppa023776mg
I
0.669
Bo8g058040
Brassica oleracea
Bo8g058040
I
0.669
SapurV1A.0876s0040
Salix purpurea
SapurV1A.0876s0040
I
0.669
Thhalv10008426m.g
Eutrema salsugineum
Thhalv10008426m.g
I
0.669
MYB60
Arabidopsis thaliana
AT1G08810
D
0.669
orange1.1g018559m.g
Citrus sinensis
orange1.1g018559m.g
I
0.669
TCM_025795
Theobroma cacao
TCM_025795
I
0.669
POPTR_0013s06390
Populus trichocarpa
POPTR_0013s06390
I
0.669
evm.TU.supercontig_73.13
Carica papaya
evm.TU.supercontig_73.13
I
0.669
cassava15268.m1
Manihot esculenta
cassava15268.m1
I
0.669
OB03G28590
Oryza brachyantha
OB03G28590
I
0.669
cassava25941.m1
Manihot esculenta
cassava25941.m1
I
0.669
MYB60
Vitis vinifera
VIT_08s0056g00800
I
0.669
OGLUM12G01990
Oryza glumaepatula
OGLUM12G01990
I
0.668
BRADI4G43937
Brachypodium distachyon
BRADI4G43937
I
0.668
TRIUR3_20609
Triticum urartu
TRIUR3_20609
I
0.668
OBART07G20460
Oryza barthii
OBART07G20460
I
0.668
OBART12G01420
Oryza barthii
OBART12G01420
I
0.668
GSMUA_AchrUn_randomG02160_001
Musa acuminata
GSMUA_AchrUn_randomG02160_001
I
0.668
OS12G0125000
Oryza sativa
OS12G0125000
I
0.668
ORUFI12G01670
Oryza rufipogon
ORUFI12G01670
I
0.668
ORGLA12G0012300
Oryza glaberrima
ORGLA12G0012300
I
0.668
OPUNC12G01500
Oryza punctata
OPUNC12G01500
I
0.668
OMERI12G00580
Oryza meridionalis
OMERI12G00580
I
0.668
Pavir.J27229
Panicum virgatum
Pavir.J27229
I
0.668
OS11G0128500
Oryza sativa
OS11G0128500
I
0.668
Pavir.J27570
Panicum virgatum
Pavir.J27570
I
0.668
OPUNC11G01450
Oryza punctata
OPUNC11G01450
I
0.668
BGIOSGA036717
Oryza indica
BGIOSGA036717
I
0.668
OB12G11580
Oryza brachyantha
OB12G11580
I
0.668
MLOC_68511
Hordeum vulgare
MLOC_68511
I
0.668
OB11G11290
Oryza brachyantha
OB11G11290
I
0.668
Traes_5BL_557E7700B
Triticum aestivum
Traes_5BL_557E7700B
I
0.668
Traes_5DL_36CD3229A
Triticum aestivum
Traes_5DL_36CD3229A
I
0.668
LPERR12G01520
Leersia perrieri
LPERR12G01520
I
0.668
Si026651m.g
Setaria italica
Si026651m.g
I
0.668
MLOC_72230
Hordeum vulgare
MLOC_72230
I
0.668
Si010608m.g
Setaria italica
Si010608m.g
I
0.668
GRMZM2G162434
Zea mays
GRMZM2G162434
I
0.668
BGIOSGA034582
Oryza indica
BGIOSGA034582
I
0.668
Sb05g001730
Sorghum bicolor
Sb05g001730
I
0.668
evm.TU.supercontig_111.6
Carica papaya
evm.TU.supercontig_111.6
I
0.667
Aquca_014_00947
Aquilegia coerulea
Aquca_014_00947
I
0.666
mgf025699m
Mimulus guttatus
mgf025699m
I
0.665
MTR_0140s0030
Medicago truncatula
MTR_0140s0030
I
0.664
MTR_0489s0020
Medicago truncatula
MTR_0489s0020
I
0.664
PK07857.1
Cannabis sativa
PK07857.1
I
0.663
GSMUA_Achr9G17050_001
Musa acuminata
GSMUA_Achr9G17050_001
I
0.663
MTR_7g087130
Medicago truncatula
MTR_7g087130
I
0.663
GLYMA03G00890
Glycine max
GLYMA03G00890
I
0.663
Carubv10009957m.g
Capsella rubella
Carubv10009957m.g
I
0.663
Solyc10g081490.1
Solanum lycopersicum
Solyc10g081490.1
I
0.663
Cagra.4395s0068
Capsella grandiflora
Cagra.4395s0068
I
0.663
Aquca_009_00018
Aquilegia coerulea
Aquca_009_00018
I
0.663
Bostr.25219s0065
Boechera stricta
Bostr.25219s0065
I
0.663
GLYMA19G29750
Glycine max
GLYMA19G29750
I
0.663
Gorai.013G196800
Gossypium raimondii
Gorai.013G196800
I
0.663
MDP0000163673
Malus domestica
MDP0000163673
I
0.663
MDP0000168550
Malus domestica
MDP0000168550
I
0.663
PGSC0003DMG400006930
Solanum tuberosum
PGSC0003DMG400006930
I
0.663
PGSC0003DMG400028125
Solanum tuberosum
PGSC0003DMG400028125
I
0.663
Bra018598
Brassica rapa
Bra018598
I
0.663
Ca_08170
Cicer arietinum
Ca_08170
I
0.663
Gorai.012G054500
Gossypium raimondii
Gorai.012G054500
I
0.661