CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SPRG_04083
(
Saprolegnia parasitica
)
Myb/SANT,RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
PF02042 (RWP-RK)
IPR014778
IPR003035
SPRG_04083
T291883_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPRG_04083T0
RWP-RK
86
145
AANRMKYQATKLISIDELRDHFDQPIVEVARHFGICITLMKKVCRRNGIKRWPHRQIRSL
SPRG_04083T0
Myb
273
318
GGRWTAQEHASFLEGIKLYGKNWRRVAQVVGTRNAVQTRTHAQKYL
Links
Other
Myb/SANT,RWP-RK
family TFs
Other
Saprolegnia parasitica
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.46568.2035
Phytophthora kernoviae
fgenesh_scip_prom.46568.2035
N
0.842
maker-pir_contig_27-fgenesh-gene-0.10
Pythium irregulare
maker-pir_contig_27-fgenesh-gene-0.10
N
0.842
Phyra84850
Phytophthora ramorum
Phyra84850
N
0.842
fgenesh_scip_prom.28083.9508
Phytophthora lateralis
fgenesh_scip_prom.28083.9508
N
0.842
PYU1_G014072
Pythium ultimum
PYU1_G014072
N
0.842
Physo141522
Phytophthora sojae
Physo141522
N
0.832
PITG_12426
Phytophthora infestans
PITG_12426
N
0.832
F443_19709
Phytophthora parasitica
F443_19709
N
0.832
F443_22790
Phytophthora parasitica
F443_22790
N
0.832
maker-par_contig_1326-snap-gene-0.5
Pythium arrhenomanes
maker-par_contig_1326-snap-gene-0.5
N
0.821
ALNC14_106830
Albugo laibachii
ALNC14_106830
N
0.811
ALNC14_121160
Albugo laibachii
ALNC14_121160
N
0.811
maker-pag1_scaffold_515-snap-gene-0.10
Pythium aphanidermatum
maker-pag1_scaffold_515-snap-gene-0.10
N
0.800
maker-pve_contig_506-snap-gene-0.8
Pythium vexans
maker-pve_contig_506-snap-gene-0.8
N
0.789
estExt_fgenesh1_kg.C_01711
Phytophthora capsici
estExt_fgenesh1_kg.C_01711
N
0.758