CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_kg.C_01711
(
Phytophthora capsici
)
Myb/SANT,RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
PF02042 (RWP-RK)
IPR014778
IPR003035
estExt_fgenesh1_kg.C_01711
T291898_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_kg.C_01711
RWP-RK
135
183
HISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSL
estExt_fgenesh1_kg.C_01711
Myb
305
344
GGRWTSEEHAAFLEGIRLYGKDWRRVAQVVMTRSAVQTRX
Links
Other
Myb/SANT,RWP-RK
family TFs
Other
Phytophthora capsici
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PITG_12426
Phytophthora infestans
PITG_12426
N
0.926
F443_22790
Phytophthora parasitica
F443_22790
N
0.926
F443_19709
Phytophthora parasitica
F443_19709
N
0.926
Physo141522
Phytophthora sojae
Physo141522
N
0.926
maker-pir_contig_27-fgenesh-gene-0.10
Pythium irregulare
maker-pir_contig_27-fgenesh-gene-0.10
N
0.916
Phyra84850
Phytophthora ramorum
Phyra84850
N
0.916
PYU1_G014072
Pythium ultimum
PYU1_G014072
N
0.916
fgenesh_scip_prom.46568.2035
Phytophthora kernoviae
fgenesh_scip_prom.46568.2035
N
0.916
fgenesh_scip_prom.28083.9508
Phytophthora lateralis
fgenesh_scip_prom.28083.9508
N
0.916
maker-pve_contig_506-snap-gene-0.8
Pythium vexans
maker-pve_contig_506-snap-gene-0.8
N
0.878
ALNC14_106830
Albugo laibachii
ALNC14_106830
N
0.875
ALNC14_121160
Albugo laibachii
ALNC14_121160
N
0.875
maker-par_contig_1326-snap-gene-0.5
Pythium arrhenomanes
maker-par_contig_1326-snap-gene-0.5
N
0.874
maker-pag1_scaffold_515-snap-gene-0.10
Pythium aphanidermatum
maker-pag1_scaffold_515-snap-gene-0.10
N
0.832
SPRG_04083
Saprolegnia parasitica
SPRG_04083
N
0.758