CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pag1_scaffold_128-snap-gene-0.22
(
Pythium aphanidermatum
)
Myb/SANT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
PF00505 (HMG_box)
IPR014778
IPR000910
maker-pag1_scaffold_128-snap-gene-0.22
T291906_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000017104
Sox
34
110
PVKAKTAFQFFQKKVMNEVKGELAAQSAERGEALELGSIMKEVSARWQQLTSEEKDEFNELAAEDRKRYEDECRARD
EPrPA00000017104
Myb
1067
1122
GKVFTEEEDRVLLCLVNKFGYGAWERIKQEICSLEMFAFDYYLRSRTAAEIGRRCD
EPrPA00000017104
Sox
1353
1421
IRKARSAYVLFSLDRRHEVKATMEPGVQMIEVMARLSQIWKGMTDDEKSRWVEAAKQDKLRYEREMNEA
Links
Other
Myb/SANT,Sox
family TFs
Other
Pythium aphanidermatum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-par_contig_38-fgenesh-gene-0.6
Pythium arrhenomanes
maker-par_contig_38-fgenesh-gene-0.6
N
0.785
maker-pir_contig_655-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_655-fgenesh-gene-0.0
N
0.718