CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00007p00063550
(
Amborella trichopoda
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AMTR_s00007p00063550
T291966_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN05222
NAC/NAM
12
138
PPGFRFNPTDEELIVHYLQNKVTSRPMPVSLIADIDLYKFDPWDLPSRALFGENEWFFFSPRDRKYPNGARPNRAAASGYWKATGTDKPILASCGNESLGVKKGLVFYKGRPPKGIKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Amborella trichopoda
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.contig_33298
Carica papaya
evm.TU.contig_33298
I
0.914
Eucgr.B02485
Eucalyptus grandis
Eucgr.B02485
I
0.902
Si030267m.g
Setaria italica
Si030267m.g
I
0.899
GRMZM2G430849
Zea mays
GRMZM2G430849
I
0.893
30078.m002348
Ricinus communis
30078.m002348
I
0.891
Gorai.011G030600
Gossypium raimondii
Gorai.011G030600
N
0.889
30111.m000742
Ricinus communis
30111.m000742
N
0.889
POPTR_0011s05760
Populus trichocarpa
POPTR_0011s05760
N
0.885
Pavir.J22666
Panicum virgatum
Pavir.J22666
I
0.884
Thhalv10012308m.g
Eutrema salsugineum
Thhalv10012308m.g
I
0.882
OMERI07G23240
Oryza meridionalis
OMERI07G23240
I
0.881
ORGLA07G0209600
Oryza glaberrima
ORGLA07G0209600
I
0.881
ORUFI07G27590
Oryza rufipogon
ORUFI07G27590
I
0.881
BGIOSGA026407
Oryza indica
BGIOSGA026407
I
0.881
OGLUM07G26640
Oryza glumaepatula
OGLUM07G26640
I
0.881
orange1.1g045934m.g
Citrus sinensis
orange1.1g045934m.g
N
0.881
TCM_041055
Theobroma cacao
TCM_041055
I
0.881
Lus10036117.g
Linum usitatissimum
Lus10036117.g
I
0.881
OGLUM07G26630
Oryza glumaepatula
OGLUM07G26630
I
0.881
OBART07G26600
Oryza barthii
OBART07G26600
I
0.881
BRADI1G17480
Brachypodium distachyon
BRADI1G17480
I
0.880
Traes_2BS_C116E5668
Triticum aestivum
Traes_2BS_C116E5668
I
0.878
Ciclev10030252m.g
Citrus clementina
Ciclev10030252m.g
N
0.878
Traes_2BS_924D34AA1
Triticum aestivum
Traes_2BS_924D34AA1
I
0.878
POPTR_0004s04920
Populus trichocarpa
POPTR_0004s04920
I
0.878
F775_02328
Aegilops tauschii
F775_02328
I
0.878
Gorai.006G088400
Gossypium raimondii
Gorai.006G088400
I
0.877
Lus10007410.g
Linum usitatissimum
Lus10007410.g
I
0.877
cassava3577.m1
Manihot esculenta
cassava3577.m1
I
0.877
Lus10013964.g
Linum usitatissimum
Lus10013964.g
N
0.876
Sb01g036560
Sorghum bicolor
Sb01g036560
I
0.875
Eucgr.J00940
Eucalyptus grandis
Eucgr.J00940
N
0.874
evm.TU.supercontig_435.1
Carica papaya
evm.TU.supercontig_435.1
N
0.874
LPERR03G13950
Leersia perrieri
LPERR03G13950
I
0.874
Sb02g043210
Sorghum bicolor
Sb02g043210
I
0.873
GLYMA13G40251
Glycine max
GLYMA13G40251
I
0.873
OLONG_012944
Oryza longistaminata
OLONG_012944
I
0.873
Bo6g030920
Brassica oleracea
Bo6g030920
I
0.873
Bra018997
Brassica rapa
Bra018997
I
0.873
chr3.CM0111.130.nd
Lotus japonicus
chr3.CM0111.130.nd
I
0.872
Pavir.Bb03737
Panicum virgatum
Pavir.Bb03737
I
0.872
TCM_029796
Theobroma cacao
TCM_029796
I
0.872
GLYMA19G36421
Glycine max
GLYMA19G36421
I
0.872
GLYMA05G15533
Glycine max
GLYMA05G15533
I
0.871
OB05G24480
Oryza brachyantha
OB05G24480
I
0.871