AMTR_s00011p00251570 (Amborella trichopoda)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AMTR_s00011p00251570 T291970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG

CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.944 0.912
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG

CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.936 0.886
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG

CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.936 0.886
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG

CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.934 0.895
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN

NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.934 0.895
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.909 0.842
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN

NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.890 0.860
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG

CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.890 0.860
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG

CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.890 0.860
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM94732 NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Amborella trichopoda TFs

355 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30190.m011218 Ricinus communis 30190.m011218 N 0.000
AMTR_s00009p00253500 Amborella trichopoda AMTR_s00009p00253500 N 0.000
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N 0.000
AT1G63490 Arabidopsis thaliana AT1G63490 N 0.000
Bo9g029100 Brassica oleracea Bo9g029100 N 0.000
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N 0.000
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N 0.000
Cagra.2104s0024 Capsella grandiflora Cagra.2104s0024 N 0.000
chr1.CM0121.100.nd Lotus japonicus chr1.CM0121.100.nd N 0.000
chr1.CM0121.260.nc Lotus japonicus chr1.CM0121.260.nc N 0.000
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N 0.000
Cla007529 Citrullus lanatus Cla007529 I 0.000
Cla011637 Citrullus lanatus Cla011637 N 0.000
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N 0.000
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N 0.000
GLYMA01G42890 Glycine max GLYMA01G42890 N 0.000
GLYMA11G02580 Glycine max GLYMA11G02580 N 0.000
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N 0.000
GRMZM2G466292 Zea mays GRMZM2G466292 N 0.000
Lus10008495.g Linum usitatissimum Lus10008495.g N 0.000
MDP0000158904 Malus domestica MDP0000158904 N 0.000
MDP0000162827 Malus domestica MDP0000162827 N 0.000
MDP0000286412 Malus domestica MDP0000286412 N 0.000
MDP0000287313 Malus domestica MDP0000287313 N 0.000
mgf018831m Mimulus guttatus mgf018831m N 0.000
MTR_5g010300 Medicago truncatula MTR_5g010300 N 0.000
orange1.1g000212m.g Citrus sinensis orange1.1g000212m.g N 0.000
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.000
PDK_20s1401711g002 Phoenix dactylifera PDK_20s1401711g002 N 0.000
PK05702.1 Cannabis sativa PK05702.1 N 0.000
Pm023825 Prunus mume Pm023825 N 0.000
Sb10g031260 Sorghum bicolor Sb10g031260 N 0.000
scaffold_200168.1 Arabidopsis lyrata scaffold_200168.1 N 0.000
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N 0.000
TCM_016246 Theobroma cacao TCM_016246 N 0.000
Thhalv10023217m.g Eutrema salsugineum Thhalv10023217m.g N 0.000