AMTR_s00011p00251570 (Amborella trichopoda)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AMTR_s00011p00251570 T291970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG

CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.944 0.912
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG

CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.936 0.886
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG

CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.936 0.886
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG

CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.934 0.895
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN

NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.934 0.895
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.909 0.842
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN

NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.890 0.860
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG

CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.890 0.860
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG

CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.890 0.860
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM94732 NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Amborella trichopoda TFs

355 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bm3074 Brugia malayi Bm3074 N 0.000
EEL_0000502801 Elaeophora elaphi EEL_0000502801 N 0.000
LOAG_03084 Loa loa LOAG_03084 N 0.000
nDi.2.2.2.g01347 Dirofilaria immitis nDi.2.2.2.g01347 N 0.000
nLs.2.1.2.g04467 Litomosoides sigmodontis nLs.2.1.2.g04467 N 0.000
nOo.2.0.1.g00451 Onchocerca ochengi nOo.2.0.1.g00451 N 0.000
OFLC_0000001601 Onchocerca flexuosa OFLC_0000001601 N 0.000
TCLT_0000379501 Thelazia callipaeda TCLT_0000379501 N 0.000
WBGene00237471 Onchocerca volvulus WBGene00237471 N 0.000
WUBG_11106 Wuchereria bancrofti WUBG_11106 N 0.000