AMTR_s00011p00251570 (Amborella trichopoda)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AMTR_s00011p00251570 T291970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC037
M07187_2.00
Arabidopsis thaliana
CKTVNDNHNYAMG

CKTRNDNHNBAMG
Dap-seq
OMalley et al.(2016)
VND1_col_a
0.944 0.912
NAC007
M07164_2.00
Arabidopsis thaliana
TTRCKTVHDNNNYAMG

CKTRNNNHDBAMGYAA
Dap-seq
OMalley et al.(2016)
VND4_colamp_a
0.936 0.886
NAC007
M07165_2.00
Arabidopsis thaliana
TGCKTVHDNHDYAMG

CKTRHDNHDBAMGCA
Dap-seq
OMalley et al.(2016)
VND4_col
0.936 0.886
ANAC076
M07224_2.00
Arabidopsis thaliana
TRCKTVHNNHNYAMG

CKTRNDNNDBAMGYA
Dap-seq
OMalley et al.(2016)
VND2_col_a
0.934 0.895
ANAC076
M07225_2.00
Arabidopsis thaliana
TTGCKTVHNNHNYAMGYHAHNNN

NNNDTDRCKTRNDNNDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND2_colamp_a
0.934 0.895
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.909 0.842
NAC105
M00980_2.00
Arabidopsis thaliana
NYWHKNHWNN

NNWDNMDWRN
PBM
Lindemose et al.(2014)
VND3
0.890 0.860
NAC105
M07245_2.00
Arabidopsis thaliana
NTTGCTTVNNNHNYAMG

CKTRNDNNNBAAGCAAN
Dap-seq
OMalley et al.(2016)
VND3_colamp_a
0.890 0.860
NAC105
M07246_2.00
Arabidopsis thaliana
TTGCTTVHNNHNYAMG

CKTRNDNNDBAAGCAA
Dap-seq
OMalley et al.(2016)
VND3_col
0.890 0.860
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM94732 NAC/NAM 8 135

Links

Other NAC/NAM family TFs
Other Amborella trichopoda TFs

355 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
FRS4 Arabidopsis thaliana AT1G76320 N 0.000
Bostr.20129s0070 Boechera stricta Bostr.20129s0070 N 0.000
Bo6g120360 Brassica oleracea Bo6g120360 N 0.000
PK07805.1 Cannabis sativa PK07805.1 N 0.000
Cagra.0799s0103 Capsella grandiflora Cagra.0799s0103 N 0.000
Carubv10019871m.g Capsella rubella Carubv10019871m.g N 0.000
Ca_02661 Cicer arietinum Ca_02661 N 0.000
Cucsa.048930 Cucumis sativus Cucsa.048930 N 0.000
Thhalv10018262m.g Eutrema salsugineum Thhalv10018262m.g N 0.000
gene12562-v1.0-hybrid Fragaria vesca gene12562-v1.0-hybrid N 0.000
GLYMA13G41660 Glycine max GLYMA13G41660 N 0.000
GLYMA15G03750 Glycine max GLYMA15G03750 N 0.000
Gorai.009G072000 Gossypium raimondii Gorai.009G072000 N 0.000
MDP0000267783 Malus domestica MDP0000267783 N 0.000
MDP0000264383 Malus domestica MDP0000264383 N 0.000
cassava38027.valid.m1 Manihot esculenta cassava38027.valid.m1 N 0.000
mgf008660m Mimulus guttatus mgf008660m N 0.000
POPTR_0003s22300 Populus trichocarpa POPTR_0003s22300 N 0.000
Pm019586 Prunus mume Pm019586 N 0.000
PRUPE_ppa001996mg Prunus persica PRUPE_ppa001996mg N 0.000
SapurV1A.0009s0410 Salix purpurea SapurV1A.0009s0410 N 0.000
SapurV1A.0767s0100 Salix purpurea SapurV1A.0767s0100 I 0.000
Solyc03g121630.2 Solanum lycopersicum Solyc03g121630.2 N 0.000
TCM_013043 Theobroma cacao TCM_013043 I 0.000
TCM_040565 Theobroma cacao TCM_040565 N 0.000
FRS4 Vitis vinifera VIT_09s0054g01830 N 0.000