CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00040p00117430
(
Amborella trichopoda
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AMTR_s00040p00117430
T291983_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN13043
NAC/NAM
6
137
PIGYRFYPTEEELLSFYLKNKLDGNREAQIDRIIPLVDIYSYDPWQLPARAAEANIGDGEQWFFFVRIQERETHGGRPNRIAPSGYWKATGTPGYVYSSNNGVIGLRKSLVFYTGRAPYGRKTKWKMNEYKL
Links
Other
NAC/NAM
family TFs
Other
Amborella trichopoda
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00040p00118620
Amborella trichopoda
AMTR_s00040p00118620
N
0.942
Pavir.J13106
Panicum virgatum
Pavir.J13106
N
0.938
Si026707m.g
Setaria italica
Si026707m.g
N
0.929
Si025833m.g
Setaria italica
Si025833m.g
N
0.929
Pavir.Hb01808
Panicum virgatum
Pavir.Hb01808
N
0.927
Pavir.Ha01768
Panicum virgatum
Pavir.Ha01768
N
0.924
mgf020234m
Mimulus guttatus
mgf020234m
N
0.910
GRMZM2G439903
Zea mays
GRMZM2G439903
N
0.909
Sb05g003400
Sorghum bicolor
Sb05g003400
N
0.903
Eucgr.J00517
Eucalyptus grandis
Eucgr.J00517
N
0.898
Solyc09g010160.1
Solanum lycopersicum
Solyc09g010160.1
N
0.898
Cla003087
Citrullus lanatus
Cla003087
I
0.896
Pavir.Bb01366
Panicum virgatum
Pavir.Bb01366
N
0.891
MDP0000205938
Malus domestica
MDP0000205938
N
0.891
Eucgr.J00518
Eucalyptus grandis
Eucgr.J00518
N
0.891
GLYMA03G35570
Glycine max
GLYMA03G35570
N
0.890
GLYMA19G38211
Glycine max
GLYMA19G38211
N
0.888
PK29014.1
Cannabis sativa
PK29014.1
N
0.886
Lus10029410.g
Linum usitatissimum
Lus10029410.g
N
0.884
Ciclev10029032m.g
Citrus clementina
Ciclev10029032m.g
N
0.873
GSMUA_Achr6G19400_001
Musa acuminata
GSMUA_Achr6G19400_001
N
0.873
Pm001403
Prunus mume
Pm001403
N
0.870
PRUPE_ppa010337mg
Prunus persica
PRUPE_ppa010337mg
N
0.870
Cucsa.319840
Cucumis sativus
Cucsa.319840
I
0.870