CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00059p00187950
(
Amborella trichopoda
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AMTR_s00059p00187950
T291990_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.937
0.930
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN17661
NAC/NAM
14
140
MPGFRFHPTEEELVEFYLRRKVEGKRFSVELITFLDLYRYDPWELPAHAVIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRGERSSRPIGLKKTLVFYSGKAPKGTRSSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Amborella trichopoda
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy