CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00119p00045570
(
Amborella trichopoda
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AMTR_s00119p00045570
T292003_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC92
M00979_2.00
Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN
PBM
Lindemose et al.(2014)
ANAC092
0.884
0.868
NAC92
M00730_2.00
Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH
PBM
Chang et al.(2013)
pTH7335
0.884
0.868
NAC92
M07234_2.00
Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a
0.884
0.868
NAC92
M07235_2.00
Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW
Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a
0.884
0.868
NAC59
M11080_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC059_01
0.882
0.851
NAC098
M07239_2.00
Arabidopsis thaliana
CKTGTNNNDYAMGYHA
TDRCKTRHNNNACAMG
Dap-seq
OMalley et al.(2016)
CUC2_colamp_a
0.875
0.825
NAC098
M07240_2.00
Arabidopsis thaliana
NNNTWNCKTGHNNHWCAMG
CKTGWDNNDCAMGNWANNN
Dap-seq
OMalley et al.(2016)
CUC2_col
0.875
0.825
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERM97198
NAC/NAM
21
146
PPGFRFHPTDEELITSYLIEKVMNGSFTARAIGEADLNKCEPWDLPWKAKMGEKEWYVFCLRDRKYPTGLRTNRATEAGYWKATGKDKEIYKGRKTLVGMKKTLVFYKGRAPKGEKTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Amborella trichopoda
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK26741.1
Cannabis sativa
PK26741.1
I
0.919
Pm015914
Prunus mume
Pm015914
I
0.919
VIT_14s0108g01070
Vitis vinifera
VIT_14s0108g01070
I
0.917
TCM_018621
Theobroma cacao
TCM_018621
I
0.916
MDP0000276765
Malus domestica
MDP0000276765
I
0.913
PRUPE_ppa007883mg
Prunus persica
PRUPE_ppa007883mg
I
0.912
evm.TU.supercontig_14.101
Carica papaya
evm.TU.supercontig_14.101
I
0.906
AMTR_s00010p00266320
Amborella trichopoda
AMTR_s00010p00266320
I
0.901
Ca_22532
Cicer arietinum
Ca_22532
I
0.900
MDP0000129335
Malus domestica
MDP0000129335
I
0.899
chr4.CM0087.800.nd
Lotus japonicus
chr4.CM0087.800.nd
I
0.899
MDP0000232050
Malus domestica
MDP0000232050
I
0.899
MTR_2g078700
Medicago truncatula
MTR_2g078700
I
0.896
28649.m000212
Ricinus communis
28649.m000212
I
0.896
gene04424-v1.0-hybrid
Fragaria vesca
gene04424-v1.0-hybrid
I
0.894
cassava361.valid.m1
Manihot esculenta
cassava361.valid.m1
I
0.894
VIT_19s0014g02200
Vitis vinifera
VIT_19s0014g02200
I
0.894
PGSC0003DMG400001338
Solanum tuberosum
PGSC0003DMG400001338
I
0.892
AMTR_s00058p00136280
Amborella trichopoda
AMTR_s00058p00136280
I
0.892
Solyc02g088180.2
Solanum lycopersicum
Solyc02g088180.2
I
0.892
Aquca_002_00662
Aquilegia coerulea
Aquca_002_00662
I
0.891
GLYMA12G26190
Glycine max
GLYMA12G26190
I
0.890
GLYMA06G35660
Glycine max
GLYMA06G35660
I
0.890
LjSGA_071377.1
Lotus japonicus
LjSGA_071377.1
I
0.890
mgf003818m
Mimulus guttatus
mgf003818m
I
0.889
Eucgr.I01958
Eucalyptus grandis
Eucgr.I01958
I
0.889
POPTR_0001s40680
Populus trichocarpa
POPTR_0001s40680
I
0.889
Gorai.007G079900
Gossypium raimondii
Gorai.007G079900
I
0.889
GLYMA06G21020
Glycine max
GLYMA06G21020
I
0.889
SapurV1A.0207s0120
Salix purpurea
SapurV1A.0207s0120
I
0.889
Cucsa.122890
Cucumis sativus
Cucsa.122890
I
0.889
cassava1757.valid.m1
Manihot esculenta
cassava1757.valid.m1
I
0.888
chr3.CM0282.730.nc
Lotus japonicus
chr3.CM0282.730.nc
I
0.887
Cla023717
Citrullus lanatus
Cla023717
I
0.887
GLYMA04G33270
Glycine max
GLYMA04G33270
I
0.887
GLYMA17G10970
Glycine max
GLYMA17G10970
I
0.886
GLYMA05G00930
Glycine max
GLYMA05G00930
I
0.886
Ciclev10012093m.g
Citrus clementina
Ciclev10012093m.g
I
0.885
orange1.1g018950m.g
Citrus sinensis
orange1.1g018950m.g
I
0.885
Eucgr.B00529
Eucalyptus grandis
Eucgr.B00529
I
0.885
PK13860.1
Cannabis sativa
PK13860.1
I
0.884
evm.TU.supercontig_111.22
Carica papaya
evm.TU.supercontig_111.22
I
0.884
Bostr.10058s0039
Boechera stricta
Bostr.10058s0039
I
0.884
NAC92
Arabidopsis thaliana
AT5G39610
D
0.884
ATNAC2
Arabidopsis lyrata
fgenesh2_kg.7__3461__AT5G39610.1
I
0.884
ORUFI09G16430
Oryza rufipogon
ORUFI09G16430
I
0.883
OS09G0497900
Oryza sativa
OS09G0497900
I
0.883
OLONG_009674
Oryza longistaminata
OLONG_009674
I
0.883
ORGLA09G0117400
Oryza glaberrima
ORGLA09G0117400
I
0.883
OPUNC09G13640
Oryza punctata
OPUNC09G13640
I
0.883
OMERI07G04410
Oryza meridionalis
OMERI07G04410
I
0.883
BGIOSGA029508
Oryza indica
BGIOSGA029508
I
0.883
ONIVA09G15800
Oryza nivara
ONIVA09G15800
I
0.883
OBART09G15220
Oryza barthii
OBART09G15220
I
0.883
OGLUM09G15820
Oryza glumaepatula
OGLUM09G15820
I
0.883
Aquca_033_00035
Aquilegia coerulea
Aquca_033_00035
I
0.883
LPERR09G11330
Leersia perrieri
LPERR09G11330
I
0.883
GLYMA19G02850
Glycine max
GLYMA19G02850
I
0.883
NAC59
Arabidopsis thaliana
AT3G29035
D
0.882
gene00971-v1.0-hybrid
Fragaria vesca
gene00971-v1.0-hybrid
I
0.882
TCM_014073
Theobroma cacao
TCM_014073
I
0.882
Sb02g028870
Sorghum bicolor
Sb02g028870
I
0.882
Si030187m.g
Setaria italica
Si030187m.g
I
0.882
Pavir.J02772
Panicum virgatum
Pavir.J02772
I
0.882
GLYMA13G34950
Glycine max
GLYMA13G34950
I
0.881
Cla018878
Citrullus lanatus
Cla018878
I
0.881
Thhalv10013863m.g
Eutrema salsugineum
Thhalv10013863m.g
I
0.881
GLYMA12G35530
Glycine max
GLYMA12G35530
I
0.881
Bo9g113820
Brassica oleracea
Bo9g113820
I
0.881
Gorai.008G194400
Gossypium raimondii
Gorai.008G194400
I
0.879
ATNAC3
Arabidopsis lyrata
fgenesh2_kg.5__665__AT3G29035.1
I
0.878
Bostr.26833s0880
Boechera stricta
Bostr.26833s0880
I
0.875
CUC2
Arabidopsis lyrata
Al_scaffold_0008_1815
I
0.875
NAC098
Arabidopsis thaliana
AT5G53950
D
0.875
Cagra.4622s0005
Capsella grandiflora
Cagra.4622s0005
I
0.875
Carubv10028330m.g
Capsella rubella
Carubv10028330m.g
I
0.875
Carubv10005201m.g
Capsella rubella
Carubv10005201m.g
I
0.874
GLYMA13G05540
Glycine max
GLYMA13G05540
I
0.873
cassava1758.valid.m1
Manihot esculenta
cassava1758.valid.m1
I
0.872
PDK_20s1323531g003
Phoenix dactylifera
PDK_20s1323531g003
I
0.871
Thhalv10004550m.g
Eutrema salsugineum
Thhalv10004550m.g
I
0.871