CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NTL8
(
Arabidopsis thaliana
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AT2G27300
T292052_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NTL8
M00975_2.00
Arabidopsis thaliana
TWNCYYHNNN
NNNDRRGNWA
PBM
Lindemose et al.(2014)
NTL8
(Direct)
(Direct)
NTL8
M07190_2.00
Arabidopsis thaliana
NTTNCTTCDHNNNNARGNA
TNCYTNNNNDHGAAGNAAN
Dap-seq
OMalley et al.(2016)
NTL8_col
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.870
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00975_2.00
NAC/NAM
15
140
FPGFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPWDLPEESKLKSENEWFYFCARGRKYPHGSQSRRATQLGYWKATGKERSVKSGNQVVGTKRTLVFHIGRAPRGERTEWIMHEYCI
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G27300.1
NAC/NAM
15
140
FPGFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPWDLPEESKLKSENEWFYFCARGRKYPHGSQSRRATQLGYWKATGKERSVKSGNQVVGTKRTLVFHIGRAPRGERTEWIMHEYCI
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis thaliana
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10023568m.g
Capsella rubella
Carubv10023568m.g
I
0.961
Cagra.3125s0012
Capsella grandiflora
Cagra.3125s0012
I
0.961
Bo4g075560
Brassica oleracea
Bo4g075560
I
0.956
Bra012024
Brassica rapa
Bra012024
I
0.956
Thhalv10002300m.g
Eutrema salsugineum
Thhalv10002300m.g
I
0.938
Thhalv10002027m.g
Eutrema salsugineum
Thhalv10002027m.g
I
0.935
Bostr.28794s0029
Boechera stricta
Bostr.28794s0029
I
0.929
ANAC040
Arabidopsis lyrata
fgenesh2_kg.4__689__AT2G27300.1
I
0.918
Thhalv10002040m.g
Eutrema salsugineum
Thhalv10002040m.g
I
0.913