JUB1 (Arabidopsis thaliana)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AT2G43000 T292054_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a NAC transcription factor induced by hydrogen peroxide (H2O2. Involved in senescence. Over expression of the gene strongly delays senescence and enhances tolerance to various abiotic stresses.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JUB1
M07191_2.00		 Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR		 Dap-seq
OMalley et al.(2016)
ANAC042_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC094
M07236_2.00 		Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR		 Dap-seq
OMalley et al.(2016)
ANAC094_col_a 		0.879 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G43000.1 NAC/NAM 19 143
AT2G43000.2 NAC/NAM 2 65

Links

Other NAC/NAM family TFs
Other Arabidopsis thaliana TFs

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228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action