AT3G12910 (Arabidopsis thaliana)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AT3G12910 T292066_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.931 0.544
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.931 0.544
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.931 0.544
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.930 0.544
NAC101
M07241_2.00
Arabidopsis thaliana
TGCKTVNDNHNYAMG

CKTRNDNHNBAMGCA
Dap-seq
OMalley et al.(2016)
VND6_colamp_a
0.879 0.526
NAC101
M07242_2.00
Arabidopsis thaliana
TTGCKTVHDNNNYAMGYHWHN

NDWDRCKTRNNNHDBAMGCAA
Dap-seq
OMalley et al.(2016)
VND6_col_v31
0.879 0.526
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G12910.1 NAC/NAM 22 150

Links

Other NAC/NAM family TFs
Other Arabidopsis thaliana TFs

234 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NAC48 Oryza sativa OS01G0884300 D 0.930
NAC002 Arabidopsis thaliana AT1G01720 D 0.931
NAC101 Arabidopsis thaliana AT5G62380 D 0.879
cassava23439.valid.m1 Manihot esculenta cassava23439.valid.m1 I 0.896
Cla023594 Citrullus lanatus Cla023594 I 0.983
Cla013684 Citrullus lanatus Cla013684 I 0.873
Cla011742 Citrullus lanatus Cla011742 I 0.916
Ca_13571 Cicer arietinum Ca_13571 I 0.956
VIT_19s0027g00910 Vitis vinifera VIT_19s0027g00910 I 0.980
VIT_19s0027g00880 Vitis vinifera VIT_19s0027g00880 I 0.873
VIT_19s0027g00870 Vitis vinifera VIT_19s0027g00870 I 0.879
VIT_19s0027g00840 Vitis vinifera VIT_19s0027g00840 I 0.977
anac032 Vitis vinifera VIT_18s0001g02300 I 0.934
anac042 Vitis vinifera VIT_12s0028g00860 I 0.904
VIT_06s0004g00020 Vitis vinifera VIT_06s0004g00020 I 0.940
cassava27052.m1 Manihot esculenta cassava27052.m1 I 0.871
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.933
mgf002183m Mimulus guttatus mgf002183m I 0.895
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.921
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I 0.922
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.924
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.948
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.938
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.943
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.934
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.935
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.941
Cucsa.058780 Cucumis sativus Cucsa.058780 I 0.963
cassava4505.m1 Manihot esculenta cassava4505.m1 I 0.891
cassava39074.m1 Manihot esculenta cassava39074.m1 I 0.965
TRIUR3_29260 Triticum urartu TRIUR3_29260 I 0.892
TRIUR3_18561 Triticum urartu TRIUR3_18561 I 0.871
TRIUR3_14109 Triticum urartu TRIUR3_14109 I 0.927
Si036303m.g Setaria italica Si036303m.g I 0.938
Si032702m.g Setaria italica Si032702m.g I 0.911
Si030752m.g Setaria italica Si030752m.g I 0.929
Si022723m.g Setaria italica Si022723m.g I 0.942
Si022714m.g Setaria italica Si022714m.g I 0.958
Si002413m.g Setaria italica Si002413m.g I 0.929
SELMODRAFT_86855 Selaginella moellendorffii SELMODRAFT_86855 I 0.877
SELMODRAFT_71307 Selaginella moellendorffii SELMODRAFT_71307 I 0.877
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.927
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.965
Sb03g041920 Sorghum bicolor Sb03g041920 I 0.930
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.911
Solyc02g069960.2 Solanum lycopersicum Solyc02g069960.2 I 0.883
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.924
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.906
Traes_7DL_D05DA373C Triticum aestivum Traes_7DL_D05DA373C I 0.892
Traes_7BL_8A5D12EE1 Triticum aestivum Traes_7BL_8A5D12EE1 I 0.882
Traes_7AL_74CC91D39 Triticum aestivum Traes_7AL_74CC91D39 I 0.896
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.906
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.906
TRAES3BF100600040CFD_g Triticum aestivum TRAES3BF100600040CFD_g I 0.871
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I 0.927
TCM_035160 Theobroma cacao TCM_035160 I 0.932
TCM_029796 Theobroma cacao TCM_029796 I 0.892
TCM_029321 Theobroma cacao TCM_029321 I 0.965
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.926
Sb02g026510 Sorghum bicolor Sb02g026510 I 0.904
PK26157.1 Cannabis sativa PK26157.1 I 0.934
SapurV1A.0059s0580 Salix purpurea SapurV1A.0059s0580 I 0.972
SapurV1A.0039s0530 Salix purpurea SapurV1A.0039s0530 I 0.904
Pavir.J31204 Panicum virgatum Pavir.J31204 I 0.956
Pavir.J04049 Panicum virgatum Pavir.J04049 I 0.896
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.940
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.946
Pavir.Ea03621 Panicum virgatum Pavir.Ea03621 I 0.939
Pavir.Cb00167 Panicum virgatum Pavir.Cb00167 I 0.965
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.911
Pavir.Bb00806 Panicum virgatum Pavir.Bb00806 I 0.930
Pavir.Ba03301 Panicum virgatum Pavir.Ba03301 I 0.930
Pavir.Ba02443 Panicum virgatum Pavir.Ba02443 I 0.947
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.978
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.940
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.917
PK05686.1 Cannabis sativa PK05686.1 I 0.878
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.938
Thhalv10021225m.g Eutrema salsugineum Thhalv10021225m.g I 0.995
Thhalv10017054m.g Eutrema salsugineum Thhalv10017054m.g I 0.888
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.908
Thhalv10004488m.g Eutrema salsugineum Thhalv10004488m.g I 0.886
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.937
SapurV1A.2021s0010 Salix purpurea SapurV1A.2021s0010 I 0.914
SapurV1A.0958s0170 Salix purpurea SapurV1A.0958s0170 I 0.873
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.936
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.935
SapurV1A.0354s0230 Salix purpurea SapurV1A.0354s0230 I 0.884
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.911
Gorai.010G236700 Gossypium raimondii Gorai.010G236700 I 0.973
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.931
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.931
Bostr.3640s0064 Boechera stricta Bostr.3640s0064 I 0.994
Bostr.0568s0569 Boechera stricta Bostr.0568s0569 I 0.879
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I 0.884
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.935
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.893
mgf023960m Mimulus guttatus mgf023960m I 0.899
mgf019285m Mimulus guttatus mgf019285m I 0.885
mgf015836m Mimulus guttatus mgf015836m I 0.904
mgf013201m Mimulus guttatus mgf013201m I 0.946
mgf004020m Mimulus guttatus mgf004020m I 0.915
Cagra.4003s0027 Capsella grandiflora Cagra.4003s0027 I 0.882
Cagra.5641s0055 Capsella grandiflora Cagra.5641s0055 I 0.994
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.931
Gorai.010G171100 Gossypium raimondii Gorai.010G171100 I 0.968
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.932
Gorai.009G357700 Gossypium raimondii Gorai.009G357700 I 0.884
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.905
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.941
Gorai.002G036700 Gossypium raimondii Gorai.002G036700 I 0.871
Gorai.001G091900 Gossypium raimondii Gorai.001G091900 I 0.903
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.908
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.908
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.977
Carubv10026697m.g Capsella rubella Carubv10026697m.g I 0.882
Carubv10014270m.g Capsella rubella Carubv10014270m.g I 0.994
mgf002365m Mimulus guttatus mgf002365m I 0.888
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.934
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.880
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.930
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.887
GSMUA_Achr10G08120_001 Musa acuminata GSMUA_Achr10G08120_001 I 0.974
GRMZM2G475014 Zea mays GRMZM2G475014 I 0.961
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.933
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.934
GRMZM2G052239 Zea mays GRMZM2G052239 I 0.942
GRMZM2G014653 Zea mays GRMZM2G014653 I 0.929
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.933
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.924
fgenesh2_kg.3__1353__AT3G12910.1 Arabidopsis lyrata fgenesh2_kg.3__1353__AT3G12910.1 I 0.995
VND6 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001814 I 0.879
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.971
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.922
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.872
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.911
LPERR08G17020 Leersia perrieri LPERR08G17020 I 0.886
LPERR07G06440 Leersia perrieri LPERR07G06440 I 0.922
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.922
LPERR05G13140 Leersia perrieri LPERR05G13140 I 0.881
LPERR04G17350 Leersia perrieri LPERR04G17350 I 0.877
LPERR01G34090 Leersia perrieri LPERR01G34090 I 0.930
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.974
GSMUA_Achr7G23250_001 Musa acuminata GSMUA_Achr7G23250_001 I 0.913
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.941
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.968
F775_28813 Aegilops tauschii F775_28813 I 0.927
F775_23543 Aegilops tauschii F775_23543 I 0.871
F775_20638 Aegilops tauschii F775_20638 I 0.896
Bo3g107700 Brassica oleracea Bo3g107700 I 0.886
Bo3g065200 Brassica oleracea Bo3g065200 I 0.990
Bo2g164090 Brassica oleracea Bo2g164090 I 0.886
Bo1g138800 Brassica oleracea Bo1g138800 I 0.995
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.909
BGIOSGA026695 Oryza indica BGIOSGA026695 I 0.889
BGIOSGA019897 Oryza indica BGIOSGA019897 I 0.929
BGIOSGA018048 Oryza indica BGIOSGA018048 I 0.921
BGIOSGA014034 Oryza indica BGIOSGA014034 I 0.929
BGIOSGA000374 Oryza indica BGIOSGA000374 I 0.930
NAC026 Arabidopsis thaliana AT1G62700 I 0.938
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.883
Bo5g001100 Brassica oleracea Bo5g001100 I 0.931
Bo5g133050 Brassica oleracea Bo5g133050 I 0.990
F775_13961 Aegilops tauschii F775_13961 I 0.906
F775_11764 Aegilops tauschii F775_11764 I 0.892
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.911
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I 0.927
BRADI2G03467 Brachypodium distachyon BRADI2G03467 I 0.924
Bra039353 Brassica rapa Bra039353 I 0.995
Bra035896 Brassica rapa Bra035896 I 0.871
Bra034719 Brassica rapa Bra034719 I 0.990
Bra033239 Brassica rapa Bra033239 I 0.931
Bra029266 Brassica rapa Bra029266 I 0.886
Bra010077 Brassica rapa Bra010077 I 0.880
Bo9g014940 Brassica oleracea Bo9g014940 I 0.879
AMTR_s00017p00255350 Amborella trichopoda AMTR_s00017p00255350 I 0.906
MLOC_13932 Hordeum vulgare MLOC_13932 I 0.891
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.907
ORUFI05G17750 Oryza rufipogon ORUFI05G17750 I 0.921
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I 0.929
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I 0.930
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.909
ORGLA08G0177600 Oryza glaberrima ORGLA08G0177600 I 0.890
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I 0.929
ORGLA05G0143100 Oryza glaberrima ORGLA05G0143100 I 0.921
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I 0.929
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I 0.930
OPUNC08G18240 Oryza punctata OPUNC08G18240 I 0.887
OPUNC05G14600 Oryza punctata OPUNC05G14600 I 0.921
OPUNC04G28220 Oryza punctata OPUNC04G28220 I 0.928
ORUFI05G18190 Oryza rufipogon ORUFI05G18190 I 0.901
ORUFI08G22550 Oryza rufipogon ORUFI08G22550 I 0.890
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I 0.911
POPTR_0005s10610 Populus trichocarpa POPTR_0005s10610 I 0.883
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.917
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.908
POPTR_0003s14950 Populus trichocarpa POPTR_0003s14950 I 0.971
POPTR_0002s05820 Populus trichocarpa POPTR_0002s05820 I 0.873
PGSC0003DMG400039898 Solanum tuberosum PGSC0003DMG400039898 I 0.985
PGSC0003DMG400021119 Solanum tuberosum PGSC0003DMG400021119 I 0.887
PGSC0003DMG400009920 Solanum tuberosum PGSC0003DMG400009920 I 0.912
OS08G0511200 Oryza sativa OS08G0511200 I 0.890
OS05G0415400 Oryza sativa OS05G0415400 I 0.921
OS04G0691300 Oryza sativa OS04G0691300 I 0.929
OPUNC01G38300 Oryza punctata OPUNC01G38300 I 0.930
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.909
ONIVA08G22710 Oryza nivara ONIVA08G22710 I 0.889
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I 0.930
OBART05G16540 Oryza barthii OBART05G16540 I 0.921
OBART01G39590 Oryza barthii OBART01G39590 I 0.930
OB09G25590 Oryza brachyantha OB09G25590 I 0.909
OB05G24820 Oryza brachyantha OB05G24820 I 0.927
OB01G48340 Oryza brachyantha OB01G48340 I 0.930
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.923
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.968
MTR_2g068880 Medicago truncatula MTR_2g068880 I 0.970
MLOC_65286 Hordeum vulgare MLOC_65286 I 0.885
MLOC_59162 Hordeum vulgare MLOC_59162 I 0.930
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.906
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I 0.929
OGLUM05G17550 Oryza glumaepatula OGLUM05G17550 I 0.921
ONIVA05G17670 Oryza nivara ONIVA05G17670 I 0.929
ONIVA05G17220 Oryza nivara ONIVA05G17220 I 0.921
ONIVA05G14200 Oryza nivara ONIVA05G14200 I 0.876
ONIVA04G29890 Oryza nivara ONIVA04G29890 I 0.929
ONIVA01G44460 Oryza nivara ONIVA01G44460 I 0.930
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.909
OMERI05G14410 Oryza meridionalis OMERI05G14410 I 0.908
OMERI04G25730 Oryza meridionalis OMERI04G25730 I 0.931
OMERI01G36460 Oryza meridionalis OMERI01G36460 I 0.930
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.909
OGLUM08G21360 Oryza glumaepatula OGLUM08G21360 I 0.890
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I 0.929
MLOC_37364 Hordeum vulgare MLOC_37364 I 0.892