NAC062 (Arabidopsis thaliana)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AT3G49530 T292077_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC062
M00977_2.00		 Arabidopsis thaliana
NTTMCTTAV
BTAAGKAAN		 PBM
Lindemose et al.(2014)
NTL6		 (Direct) (Direct)
NAC062
M07212_2.00		 Arabidopsis thaliana
CTTMNHNNBYAAGNWWHN
NDWWNCTTRVNNDNKAAG		 Dap-seq
OMalley et al.(2016)
ANAC062_colamp_a		 (Direct) (Direct)
NAC062
M07213_2.00		 Arabidopsis thaliana
TNCTTMDBNNBYAAG
CTTRVNNVHKAAGNA		 Dap-seq
OMalley et al.(2016)
ANAC062_col		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.870 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00977_2.00 NAC/NAM 14 141

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G49530.1 NAC/NAM 14 141
AT3G49530.2 NAC/NAM 14 141

Links

Other NAC/NAM family TFs
Other Arabidopsis thaliana TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC062 Arabidopsis lyrata scaffold_501948.1 I 0.948
Cagra.1838s0033 Capsella grandiflora Cagra.1838s0033 I 0.944
Carubv10017199m.g Capsella rubella Carubv10017199m.g I 0.944
Bostr.6864s0295 Boechera stricta Bostr.6864s0295 I 0.943
Thhalv10010340m.g Eutrema salsugineum Thhalv10010340m.g I 0.930
Bra019599 Brassica rapa Bra019599 I 0.922
Bra017980 Brassica rapa Bra017980 I 0.919
Bo8g077840 Brassica oleracea Bo8g077840 I 0.919
Bo3g109540 Brassica oleracea Bo3g109540 I 0.882