NAC68 (Arabidopsis thaliana)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AT4G01540 T292084_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC68
M07214_2.00		 Arabidopsis thaliana
RCTTVYNBNNYAAGY
RCTTRNNVNRBAAGY		 Dap-seq
OMalley et al.(2016)
NTM1_col_a		 (Direct) (Direct)
NAC68
M07215_2.00		 Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN
NNNDRDRDNNAAAAAGYRRHD		 Dap-seq
OMalley et al.(2016)
NTM1_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.932 0.716
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G01540.1 NAC/NAM 5 136
AT4G01540.2 NAC/NAM 5 136
AT4G01540.3 NAC/NAM 5 136
AT4G01540.4 NAC/NAM 5 136

Links

Other NAC/NAM family TFs
Other Arabidopsis thaliana TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac067 Arabidopsis thaliana AT4G01520 I 0.991
Bra036327 Brassica rapa Bra036327 I 0.952
Bostr.4825s0021 Boechera stricta Bostr.4825s0021 I 0.952
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.950
Bo00853s060 Brassica oleracea Bo00853s060 I 0.946
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.940
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.933
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.932
Bo9g004100 Brassica oleracea Bo9g004100 I 0.932
NAC69 Arabidopsis thaliana AT4G01550 D 0.932
Bra008553 Brassica rapa Bra008553 I 0.931
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.926
Bo9g004090 Brassica oleracea Bo9g004090 I 0.923
Bo6g119080 Brassica oleracea Bo6g119080 I 0.923
Bo9g004110 Brassica oleracea Bo9g004110 I 0.909
Bra036326 Brassica rapa Bra036326 I 0.895
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.886
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.883
Bra036328 Brassica rapa Bra036328 I 0.876
Bo9g004070 Brassica oleracea Bo9g004070 I 0.873
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.872