BRN2 (Arabidopsis thaliana)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 AT4G10350 T292086_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRN2
M07217_2.00		 Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG		 Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a		 (Direct) (Direct)
BRN2
M07218_2.00		 Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA		 Dap-seq
OMalley et al.(2016)
ANAC070_col		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.922 0.825
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.922 0.825
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.912 0.798
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.902 0.807
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.873 0.798
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT4G10350.1 NAC/NAM 10 137
AT4G10350.2 NAC/NAM 2 90

Links

Other NAC/NAM family TFs
Other Arabidopsis thaliana TFs

247 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O5_05211 Cladophialophora psammophila A1O5_05211 N 0.000
A1O9_07021 Exophiala aquamarina A1O9_07021 N 0.000
ACRE_069230 Acremonium chrysogenum ACRE_069230 N 0.000
BBA_07453 Beauveria bassiana BBA_07453 N 0.000
BBA_08510 Beauveria bassiana BBA_08510 N 0.000
CCM_04496 Cordyceps militaris CCM_04496 N 0.000
FFUJ_11519 Fusarium fujikuroi FFUJ_11519 N 0.000
FOXG_02565 Fusarium oxysporum FOXG_02565 N 0.000
HMPREF1541_00544 Cyphellophora europaea HMPREF1541_00544 N 0.000
M437DRAFT_47167 Aureobasidium melanogenum M437DRAFT_47167 N 0.000
MBM_08217 Marssonina brunnea MBM_08217 N 0.000
OIDMADRAFT_97438 Oidiodendron maius OIDMADRAFT_97438 N 0.000
PODANS_3_4320 Podospora anserina PODANS_3_4320 N 0.000
PV08_06958 Exophiala spinifera PV08_06958 N 0.000
S40285_05664 Stachybotrys chlorohalonata S40285_05664 N 0.000
S40288_04224 Stachybotrys chartarum S40288_04224 N 0.000
SBOR_5781 Sclerotinia borealis SBOR_5781 N 0.000
SBOR_6218 Sclerotinia borealis SBOR_6218 N 0.000
W97_07560 Coniosporium apollinis W97_07560 N 0.000
Z517_00801 Fonsecaea pedrosoi Z517_00801 N 0.000