TF Information

ANAC076 *(Arabidopsis thaliana)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02365 (NAM)	IPR003441	AT4G36160	T292093_2.00	Ensembl (2018-Dec-8)	Link out
NCBI Gene Info: Encodes a NAC-domain transcription factor that is expressed in developing vessels and protoxylem. Along with other members of this family, VND1 appears to regulate the development of genes required for secondary cell wall biosynthesis.
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ANAC076 M07224_2.00	Arabidopsis thaliana	TRCKTVHNNHNYAMG	CKTRNDNNDBAMGYA	Dap-seq OMalley et al.(2016) VND2_col_a	(Direct)	(Direct)
ANAC076 M07225_2.00	Arabidopsis thaliana	TTGCKTVHNNHNYAMGYHAHNNN	NNNDTDRCKTRNDNNDBAMGCAA	Dap-seq OMalley et al.(2016) VND2_colamp_a	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC037 M07187_2.00	Arabidopsis thaliana	CKTVNDNHNYAMG	CKTRNDNHNBAMG	Dap-seq OMalley et al.(2016) VND1_col_a	0.968	0.956
NAC105 M00980_2.00	Arabidopsis thaliana	NYWHKNHWNN	NNWDNMDWRN	PBM Lindemose et al.(2014) VND3	0.932	0.851
NAC105 M07245_2.00	Arabidopsis thaliana	NTTGCTTVNNNHNYAMG	CKTRNDNNNBAAGCAAN	Dap-seq OMalley et al.(2016) VND3_colamp_a	0.932	0.851
NAC105 M07246_2.00	Arabidopsis thaliana	TTGCTTVHNNHNYAMG	CKTRNDNNDBAAGCAA	Dap-seq OMalley et al.(2016) VND3_col	0.932	0.851
NAC007 M07164_2.00	Arabidopsis thaliana	TTRCKTVHDNNNYAMG	CKTRNNNHDBAMGYAA	Dap-seq OMalley et al.(2016) VND4_colamp_a	0.928	0.842
NAC007 M07165_2.00	Arabidopsis thaliana	TGCKTVHDNHDYAMG	CKTRHDNHDBAMGCA	Dap-seq OMalley et al.(2016) VND4_col	0.928	0.842
NAC030 M00974_2.00	Arabidopsis thaliana	NYACGBMWNN	NNWKVCGTRN	PBM Lindemose et al.(2014) VND7	0.877	0.789
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AT4G36160.1	NAC/NAM	11	138	PPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKSKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRL
AT4G36160.2	NAC/NAM	15	142	PPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKSKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRL
AT4G36160.3	NAC/NAM	11	138	PPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQESCRIGYEERNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKSKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Arabidopsis thaliana* TFs

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328 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action