BGIOSGA015018 (Oryza indica)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 BGIOSGA015018 T292178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BRN2
M07217_2.00
Arabidopsis thaliana
CKTVHDNNNYAMGYWA

TWRCKTRNNNHDBAMG
Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a
0.965 0.886
BRN2
M07218_2.00
Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH

DDTWRCKTRHDNHDBAMGHWA
Dap-seq
OMalley et al.(2016)
ANAC070_col
0.965 0.886
SMB
M07184_2.00
Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH

DRTWRCKTRNDNHDBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_col_a
0.923 0.816
SMB
M07185_2.00
Arabidopsis thaliana
TWNCKTVNNNNNYAMG

CKTRNNNNNBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_colamp_a
0.923 0.816
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN

NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.917 0.807
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN

NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.910 0.798
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.885 0.816
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA015018-PA NAC/NAM 11 138

Links

Other NAC/NAM family TFs
Other Oryza indica TFs

Invalid Input OrderBy

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action