Bo00853s060 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo00853s060 T292281_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.986 0.826
NAC68
M07214_2.00
Arabidopsis thaliana
RCTTVYNBNNYAAGY

RCTTRNNVNRBAAGY
Dap-seq
OMalley et al.(2016)
NTM1_col_a
0.946 0.730
NAC68
M07215_2.00
Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN

NNNDRDRDNNAAAAAGYRRHD
Dap-seq
OMalley et al.(2016)
NTM1_colamp_a
0.946 0.730
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo00853s060.1 NAC/NAM 5 135

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NAC68 Arabidopsis thaliana AT4G01540 D 0.946
NAC69 Arabidopsis thaliana AT4G01550 D 0.986
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.988
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.988
Bostr.5325s0008 Boechera stricta Bostr.5325s0008 I 0.905
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.925
Bostr.5325s0018 Boechera stricta Bostr.5325s0018 I 0.905
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.915
Cagra.0334s0001 Capsella grandiflora Cagra.0334s0001 I 0.878
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.942
Bostr.4825s0021 Boechera stricta Bostr.4825s0021 I 0.922
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.939
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.931
mgf022344m Mimulus guttatus mgf022344m I 0.883
Pm028722 Prunus mume Pm028722 I 0.887
Ca_27204 Cicer arietinum Ca_27204 I 0.885
Ca_20988 Cicer arietinum Ca_20988 I 0.909
Ca_04069 Cicer arietinum Ca_04069 I 0.887
TCM_015535 Theobroma cacao TCM_015535 I 0.872
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.888
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.964
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.989
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.904
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.886
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.890
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.886
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.907
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.903
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.922
MDP0000575835 Malus domestica MDP0000575835 I 0.908
MDP0000282616 Malus domestica MDP0000282616 I 0.885
MDP0000231843 Malus domestica MDP0000231843 I 0.883
MDP0000214515 Malus domestica MDP0000214515 I 0.888
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.892
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I 0.889
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.901
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.889
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.888
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I 0.917
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I 0.873
anac067 Arabidopsis thaliana AT4G01520 I 0.957
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.886
GLYMA14G36840 Glycine max GLYMA14G36840 I 0.888
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.986
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I 0.895
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.916
Bra036328 Brassica rapa Bra036328 I 0.975
Bra036327 Brassica rapa Bra036327 I 0.975
Bra036326 Brassica rapa Bra036326 I 0.979
Bra027596 Brassica rapa Bra027596 I 0.950
Bra008553 Brassica rapa Bra008553 I 0.994
Bo9g061230 Brassica oleracea Bo9g061230 I 0.916
Bo9g004110 Brassica oleracea Bo9g004110 I 0.980
Bo9g004100 Brassica oleracea Bo9g004100 I 0.963
Bo9g004070 Brassica oleracea Bo9g004070 I 0.974
Bo6g119080 Brassica oleracea Bo6g119080 I 0.967
Bo5g002850 Brassica oleracea Bo5g002850 I 0.896
Bo5g002810 Brassica oleracea Bo5g002810 I 0.898
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I 0.874
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.892
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.908
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.884
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.910
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.895
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.899
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.899
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I 0.888
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.922
MTR_8g023930 Medicago truncatula MTR_8g023930 I 0.878
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.914
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.934
MTR_3g093050 Medicago truncatula MTR_3g093050 I 0.887
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.873
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I 0.875
Bo9g004090 Brassica oleracea Bo9g004090 I 0.967
PRUPE_ppa019780mg Prunus persica PRUPE_ppa019780mg N 0.883
Pm018442 Prunus mume Pm018442 N 0.895
Pm028718 Prunus mume Pm028718 N 0.874
PRUPE_ppa023197mg Prunus persica PRUPE_ppa023197mg N 0.898
MDP0000198108 Malus domestica MDP0000198108 N 0.893
Carubv10011623m.g Capsella rubella Carubv10011623m.g N 0.872
Cagra.1968s0044 Capsella grandiflora Cagra.1968s0044 N 0.872