Bo3g016820 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo3g016820 T292348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC48
M11084_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC6_01 		0.879 0.500
NAC002
M00970_2.00 		Arabidopsis thaliana
NBACGYAWMN
NKWTRCGTVN		 PBM
Lindemose et al.(2014)
ATAF1 		0.875 0.482
NAC002
M07159_2.00 		Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND
HNRWDDNMDWDWNNNWYACGBM		 Dap-seq
OMalley et al.(2016)
ATAF1_col_a 		0.875 0.482
NAC002
M07160_2.00 		Arabidopsis thaliana
YACGY
RCGTR		 Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a 		0.875 0.482
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g016820.1 NAC/NAM 19 144

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra006619 Brassica rapa Bra006619 I 0.993
Bo2g023820 Brassica oleracea Bo2g023820 N 0.991
Bra020182 Brassica rapa Bra020182 N 0.991
Bra002403 Brassica rapa Bra002403 N 0.990
Bostr.26527s0049 Boechera stricta Bostr.26527s0049 N 0.989
Cagra.0846s0004 Capsella grandiflora Cagra.0846s0004 N 0.989
anac089 Arabidopsis lyrata scaffold_602275.1 N 0.989
Carubv10001357m.g Capsella rubella Carubv10001357m.g N 0.989
Carubv10019187m.g Capsella rubella Carubv10019187m.g N 0.988
Bo1g063720 Brassica oleracea Bo1g063720 N 0.988
NAC089 Arabidopsis thaliana AT5G22290 N 0.988
NAC60 Arabidopsis thaliana AT3G44290 N 0.987
anac060 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000902 N 0.987
Bra021471 Brassica rapa Bra021471 N 0.986
Bostr.0556s0726 Boechera stricta Bostr.0556s0726 N 0.978
Gorai.009G083500 Gossypium raimondii Gorai.009G083500 N 0.976
Gorai.006G113700 Gossypium raimondii Gorai.006G113700 N 0.973
Ciclev10028618m.g Citrus clementina Ciclev10028618m.g N 0.972
TCM_041332 Theobroma cacao TCM_041332 N 0.969
POPTR_0009s16290 Populus trichocarpa POPTR_0009s16290 N 0.968
cassava16016.m1 Manihot esculenta cassava16016.m1 N 0.968
30055.m001612 Ricinus communis 30055.m001612 N 0.966
PGSC0003DMG400005892 Solanum tuberosum PGSC0003DMG400005892 I 0.964
SapurV1A.0561s0300 Salix purpurea SapurV1A.0561s0300 N 0.963
Solyc11g068750.1 Solanum lycopersicum Solyc11g068750.1 I 0.960
PGSC0003DMG400019615 Solanum tuberosum PGSC0003DMG400019615 I 0.960
Solyc06g074170.2 Solanum lycopersicum Solyc06g074170.2 I 0.959
Lus10034183.g Linum usitatissimum Lus10034183.g N 0.959
Lus10043402.g Linum usitatissimum Lus10043402.g N 0.959
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I 0.957
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I 0.956
Thhalv10002027m.g Eutrema salsugineum Thhalv10002027m.g I 0.954
ANAC040 Arabidopsis lyrata fgenesh2_kg.4__689__AT2G27300.1 I 0.951
GLYMA12G31211 Glycine max GLYMA12G31211 I 0.950
Lus10013316.g Linum usitatissimum Lus10013316.g N 0.949
Lus10005204.g Linum usitatissimum Lus10005204.g N 0.949
evm.TU.supercontig_195.35 Carica papaya evm.TU.supercontig_195.35 N 0.948
Thhalv10002040m.g Eutrema salsugineum Thhalv10002040m.g I 0.935
Eucgr.B03823 Eucalyptus grandis Eucgr.B03823 N 0.934
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.920
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.915
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.915
GSMUA_Achr2G11810_001 Musa acuminata GSMUA_Achr2G11810_001 I 0.909
PRUPE_ppa008321mg Prunus persica PRUPE_ppa008321mg N 0.905
GSMUA_Achr6G03200_001 Musa acuminata GSMUA_Achr6G03200_001 N 0.904
MDP0000133636 Malus domestica MDP0000133636 N 0.904
Solyc04g009440.2 Solanum lycopersicum Solyc04g009440.2 I 0.903
e_gw1.164.18.1 Physcomitrella patens e_gw1.164.18.1 I 0.903
e_gw1.5.134.1 Physcomitrella patens e_gw1.5.134.1 I 0.902
e_gw1.117.35.1 Physcomitrella patens e_gw1.117.35.1 I 0.901
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.900
Aquca_014_00255 Aquilegia coerulea Aquca_014_00255 I 0.900
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.899
e_gw1.140.53.1 Physcomitrella patens e_gw1.140.53.1 I 0.899
e_gw1.259.4.1 Physcomitrella patens e_gw1.259.4.1 I 0.899
Si022714m.g Setaria italica Si022714m.g I 0.897
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.895
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.895
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.895
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.895
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.894
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.894
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.892
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.892
OB09G25590 Oryza brachyantha OB09G25590 I 0.892
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.891
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.891
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.891
Solyc11g017470.1 Solanum lycopersicum Solyc11g017470.1 I 0.891
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.891
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.891
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.891
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.891
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.891
Si032702m.g Setaria italica Si032702m.g I 0.890
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I 0.890
e_gw1.164.26.1 Physcomitrella patens e_gw1.164.26.1 I 0.890
Gorai.010G051900 Gossypium raimondii Gorai.010G051900 I 0.889
F775_13961 Aegilops tauschii F775_13961 I 0.889
TCM_035160 Theobroma cacao TCM_035160 I 0.889
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.887
PK26157.1 Cannabis sativa PK26157.1 I 0.886
SapurV1A.0365s0200 Salix purpurea SapurV1A.0365s0200 I 0.886
SapurV1A.0740s0040 Salix purpurea SapurV1A.0740s0040 I 0.886
SapurV1A.0311s0230 Salix purpurea SapurV1A.0311s0230 I 0.886
POPTR_0005s07060 Populus trichocarpa POPTR_0005s07060 I 0.886
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.886
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.886
GSMUA_Achr4G02390_001 Musa acuminata GSMUA_Achr4G02390_001 I 0.885
Thhalv10013903m.g Eutrema salsugineum Thhalv10013903m.g N 0.884
SapurV1A.3767s0010 Salix purpurea SapurV1A.3767s0010 I 0.884
anac032 Vitis vinifera VIT_18s0001g02300 I 0.883
Gorai.005G088800 Gossypium raimondii Gorai.005G088800 I 0.883
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.883
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.881
MTR_8g094580 Medicago truncatula MTR_8g094580 I 0.880
GLYMA05G32850 Glycine max GLYMA05G32850 I 0.880
BRADI2G57100 Brachypodium distachyon BRADI2G57100 I 0.880
TRAES3BF002300010CFD_g Triticum aestivum TRAES3BF002300010CFD_g I 0.880
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.880
GSMUA_Achr6G18720_001 Musa acuminata GSMUA_Achr6G18720_001 I 0.880
MLOC_59162 Hordeum vulgare MLOC_59162 I 0.880
F775_28813 Aegilops tauschii F775_28813 I 0.880
TRIUR3_14109 Triticum urartu TRIUR3_14109 I 0.880
ORUFI01G42940 Oryza rufipogon ORUFI01G42940 I 0.879
BGIOSGA000374 Oryza indica BGIOSGA000374 I 0.879
NAC48 Oryza sativa OS01G0884300 D 0.879
LPERR01G34090 Leersia perrieri LPERR01G34090 I 0.879
OGLUM01G43820 Oryza glumaepatula OGLUM01G43820 I 0.879
OMERI01G36460 Oryza meridionalis OMERI01G36460 I 0.879
OPUNC01G38300 Oryza punctata OPUNC01G38300 I 0.879
ONIVA01G44460 Oryza nivara ONIVA01G44460 I 0.879
ORGLA01G0334900 Oryza glaberrima ORGLA01G0334900 I 0.879
cassava28909.valid.m1 Manihot esculenta cassava28909.valid.m1 I 0.879
GLYMA14G24220 Glycine max GLYMA14G24220 I 0.879
OBART01G39590 Oryza barthii OBART01G39590 I 0.879
OB01G48340 Oryza brachyantha OB01G48340 I 0.879
Sb03g041920 Sorghum bicolor Sb03g041920 I 0.878
Pavir.Ea00010 Panicum virgatum Pavir.Ea00010 I 0.878
POPTR_0007s04780 Populus trichocarpa POPTR_0007s04780 I 0.878
GRMZM2G014653 Zea mays GRMZM2G014653 I 0.878
Si002413m.g Setaria italica Si002413m.g I 0.878
LPERR05G13490 Leersia perrieri LPERR05G13490 I 0.877
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.877
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I 0.876
mgf013201m Mimulus guttatus mgf013201m I 0.876
Sb02g006680 Sorghum bicolor Sb02g006680 I 0.875
GRMZM2G079632 Zea mays GRMZM2G079632 I 0.875
Carubv10009926m.g Capsella rubella Carubv10009926m.g I 0.875
GRMZM2G162739 Zea mays GRMZM2G162739 I 0.875
Bra033239 Brassica rapa Bra033239 I 0.875
Bo5g001100 Brassica oleracea Bo5g001100 I 0.875
Cagra.1968s0112 Capsella grandiflora Cagra.1968s0112 I 0.875
Bostr.5325s0094 Boechera stricta Bostr.5325s0094 I 0.875
NAC002 Arabidopsis thaliana AT1G01720 D 0.875
ONIVA05G17670 Oryza nivara ONIVA05G17670 I 0.874
BGIOSGA019897 Oryza indica BGIOSGA019897 I 0.874
ORGLA05G0146600 Oryza glaberrima ORGLA05G0146600 I 0.874
OGLUM05G17980 Oryza glumaepatula OGLUM05G17980 I 0.874
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.873
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I 0.872
AMTR_s00082p00116910 Amborella trichopoda AMTR_s00082p00116910 N 0.871
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I 0.871
OPUNC08G03310 Oryza punctata OPUNC08G03310 I 0.871
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I 0.871
Si004195m.g Setaria italica Si004195m.g I 0.871
MDP0000907489 Malus domestica MDP0000907489 N 0.871
OMERI08G03500 Oryza meridionalis OMERI08G03500 I 0.871
OBART08G03460 Oryza barthii OBART08G03460 I 0.871
OLONG_000105 Oryza longistaminata OLONG_000105 I 0.871
OB08G13730 Oryza brachyantha OB08G13730 I 0.871