Bo3g109540 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo3g109540 T292370_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC062
M00977_2.00 		Arabidopsis thaliana
NTTMCTTAV
BTAAGKAAN		 PBM
Lindemose et al.(2014)
NTL6 		0.882 0.851
NAC062
M07212_2.00 		Arabidopsis thaliana
CTTMNHNNBYAAGNWWHN
NDWWNCTTRVNNDNKAAG		 Dap-seq
OMalley et al.(2016)
ANAC062_colamp_a 		0.882 0.851
NAC062
M07213_2.00 		Arabidopsis thaliana
TNCTTMDBNNBYAAG
CTTRVNNVHKAAGNA		 Dap-seq
OMalley et al.(2016)
ANAC062_col 		0.882 0.851
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g109540.1 NAC/NAM 14 141

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra019599 Brassica rapa Bra019599 I 0.943
Bostr.6864s0295 Boechera stricta Bostr.6864s0295 I 0.920
ANAC062 Arabidopsis lyrata scaffold_501948.1 I 0.917
Carubv10017199m.g Capsella rubella Carubv10017199m.g I 0.914
Cagra.1838s0033 Capsella grandiflora Cagra.1838s0033 I 0.914
Thhalv10010340m.g Eutrema salsugineum Thhalv10010340m.g I 0.908
cassava11768.valid.m1 Manihot esculenta cassava11768.valid.m1 N 0.902
Bra017980 Brassica rapa Bra017980 I 0.894
Bo8g077840 Brassica oleracea Bo8g077840 I 0.894
SapurV1A.0326s0320 Salix purpurea SapurV1A.0326s0320 N 0.889
POPTR_0015s00640 Populus trichocarpa POPTR_0015s00640 N 0.884
29764.m000758 Ricinus communis 29764.m000758 N 0.882
NAC062 Arabidopsis thaliana AT3G49530 D 0.882