Bo4g018490 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo4g018490 T292378_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JUB1
M07191_2.00 		Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR		 Dap-seq
OMalley et al.(2016)
ANAC042_col_a 		0.957 0.956
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g018490.1 NAC/NAM 17 141

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra004736 Brassica rapa Bra004736 I 0.958
anac042 Arabidopsis lyrata fgenesh2_kg.4__2460__AT2G43000.1 I 0.957
JUB1 Arabidopsis thaliana AT2G43000 D 0.957
Carubv10023730m.g Capsella rubella Carubv10023730m.g I 0.955
Cagra.0202s0012 Capsella grandiflora Cagra.0202s0012 I 0.955
Bo4g192870 Brassica oleracea Bo4g192870 I 0.954
Bra037743 Brassica rapa Bra037743 I 0.954
Bostr.25993s0479 Boechera stricta Bostr.25993s0479 I 0.948
Bra000282 Brassica rapa Bra000282 I 0.947
Bo3g036290 Brassica oleracea Bo3g036290 I 0.947
chr3.CM0176.150.nc Lotus japonicus chr3.CM0176.150.nc I 0.934
Thhalv10017054m.g Eutrema salsugineum Thhalv10017054m.g I 0.929
30169.m006343 Ricinus communis 30169.m006343 I 0.922
cassava34069.m1 Manihot esculenta cassava34069.m1 I 0.922
Ciclev10005465m.g Citrus clementina Ciclev10005465m.g I 0.916
orange1.1g046948m.g Citrus sinensis orange1.1g046948m.g I 0.916
Ciclev10006695m.g Citrus clementina Ciclev10006695m.g I 0.916
cassava20477.m1 Manihot esculenta cassava20477.m1 I 0.914
POPTR_0007s08340 Populus trichocarpa POPTR_0007s08340 I 0.914
Lus10031767.g Linum usitatissimum Lus10031767.g I 0.907
Lus10031189.g Linum usitatissimum Lus10031189.g I 0.907
GLYMA02G45371 Glycine max GLYMA02G45371 I 0.907
GLYMA08G41995 Glycine max GLYMA08G41995 I 0.906
GLYMA14G03441 Glycine max GLYMA14G03441 I 0.905
TCM_032393 Theobroma cacao TCM_032393 I 0.905
chr2.LjT04L10.100.nc Lotus japonicus chr2.LjT04L10.100.nc I 0.903
GLYMA15G40950 Glycine max GLYMA15G40950 I 0.899
GLYMA18G13574 Glycine max GLYMA18G13574 I 0.899
Sb02g024593 Sorghum bicolor Sb02g024593 I 0.898
GRMZM2G152543 Zea mays GRMZM2G152543 I 0.895
GRMZM2G159094 Zea mays GRMZM2G159094 I 0.895
Traes_5BL_38DFDFE41 Triticum aestivum Traes_5BL_38DFDFE41 I 0.894
Traes_5AL_F35B9FF8E Triticum aestivum Traes_5AL_F35B9FF8E I 0.894
BRADI4G30177 Brachypodium distachyon BRADI4G30177 I 0.894
Traes_5DL_0713E8429 Triticum aestivum Traes_5DL_0713E8429 I 0.894
TRIUR3_01901 Triticum urartu TRIUR3_01901 I 0.894
Pavir.Aa00706 Panicum virgatum Pavir.Aa00706 I 0.893
OS02G0745250 Oryza sativa OS02G0745250 I 0.893
ORUFI02G34050 Oryza rufipogon ORUFI02G34050 I 0.893
ORGLA02G0278900 Oryza glaberrima ORGLA02G0278900 I 0.893
OPUNC02G29910 Oryza punctata OPUNC02G29910 I 0.893
SapurV1A.0354s0230 Salix purpurea SapurV1A.0354s0230 I 0.893
Pm014764 Prunus mume Pm014764 I 0.893
Si019308m.g Setaria italica Si019308m.g I 0.893
Pavir.Ab02998 Panicum virgatum Pavir.Ab02998 I 0.893
Sb04g028015 Sorghum bicolor Sb04g028015 I 0.893
OMERI02G31030 Oryza meridionalis OMERI02G31030 I 0.893
OGLUM02G33000 Oryza glumaepatula OGLUM02G33000 I 0.893
GRMZM2G100593 Zea mays GRMZM2G100593 I 0.893
CM1835.10.nc Lotus japonicus CM1835.10.nc I 0.893
OLONG_016322 Oryza longistaminata OLONG_016322 I 0.893
LPERR02G26510 Leersia perrieri LPERR02G26510 I 0.893
MTR_5g040420 Medicago truncatula MTR_5g040420 I 0.893
BGIOSGA009044 Oryza indica BGIOSGA009044 I 0.893
ONIVA06G04660 Oryza nivara ONIVA06G04660 I 0.893
OB02G39340 Oryza brachyantha OB02G39340 I 0.893
OBART02G32360 Oryza barthii OBART02G32360 I 0.893
LjT46I09.50.nd Lotus japonicus LjT46I09.50.nd I 0.892
Aquca_006_00295 Aquilegia coerulea Aquca_006_00295 I 0.892
Gorai.001G091900 Gossypium raimondii Gorai.001G091900 I 0.892
Pavir.Bb02181 Panicum virgatum Pavir.Bb02181 I 0.892
Traes_5AL_F2A49EB8E Triticum aestivum Traes_5AL_F2A49EB8E I 0.891
AC198937.4_FG005 Zea mays AC198937.4_FG005 I 0.891
Si032144m.g Setaria italica Si032144m.g I 0.891
Pavir.Fa00893 Panicum virgatum Pavir.Fa00893 I 0.891
Si015514m.g Setaria italica Si015514m.g I 0.891
TRIUR3_04784 Triticum urartu TRIUR3_04784 I 0.891
Pavir.J08304 Panicum virgatum Pavir.J08304 I 0.891
gene03833-v1.0-hybrid Fragaria vesca gene03833-v1.0-hybrid I 0.891
PGSC0003DMG400001323 Solanum tuberosum PGSC0003DMG400001323 I 0.889
Solyc02g087920.2 Solanum lycopersicum Solyc02g087920.2 I 0.889
BGIOSGA028728 Oryza indica BGIOSGA028728 I 0.888
Traes_6DL_DA233B945 Triticum aestivum Traes_6DL_DA233B945 I 0.888
Traes_6BL_A169A3ECB Triticum aestivum Traes_6BL_A169A3ECB I 0.888
OPUNC08G13940 Oryza punctata OPUNC08G13940 I 0.888
BRADI3G59380 Brachypodium distachyon BRADI3G59380 I 0.888
LPERR08G13170 Leersia perrieri LPERR08G13170 I 0.888
MTR_6g011860 Medicago truncatula MTR_6g011860 I 0.888
PGSC0003DMG400031266 Solanum tuberosum PGSC0003DMG400031266 I 0.888
Traes_6AL_0D7866801 Triticum aestivum Traes_6AL_0D7866801 I 0.888
OGLUM08G16650 Oryza glumaepatula OGLUM08G16650 I 0.888
OBART08G15880 Oryza barthii OBART08G15880 I 0.888
OS08G0436700 Oryza sativa OS08G0436700 I 0.888
ORUFI08G17800 Oryza rufipogon ORUFI08G17800 I 0.888
OB08G23420 Oryza brachyantha OB08G23420 I 0.888
ONIVA08G17120 Oryza nivara ONIVA08G17120 I 0.888
OMERI08G13180 Oryza meridionalis OMERI08G13180 I 0.888
TCM_001955 Theobroma cacao TCM_001955 I 0.887
Pm015876 Prunus mume Pm015876 I 0.887
Sb07g021400 Sorghum bicolor Sb07g021400 I 0.886
F775_04018 Aegilops tauschii F775_04018 I 0.886
mgf023960m Mimulus guttatus mgf023960m I 0.885
Ca_26322 Cicer arietinum Ca_26322 I 0.885
PRUPE_ppa022043mg Prunus persica PRUPE_ppa022043mg I 0.885
Cla013684 Citrullus lanatus Cla013684 I 0.884
mgf026196m Mimulus guttatus mgf026196m I 0.883
anac042 Vitis vinifera VIT_12s0028g00860 I 0.882
VIT_01s0026g02360 Vitis vinifera VIT_01s0026g02360 I 0.882
PRUPE_ppa016710mg Prunus persica PRUPE_ppa016710mg I 0.881
POPTR_0004s12850 Populus trichocarpa POPTR_0004s12850 I 0.881
mgf025649m Mimulus guttatus mgf025649m I 0.881
MTR_8g467490 Medicago truncatula MTR_8g467490 I 0.881
MLOC_60079 Hordeum vulgare MLOC_60079 I 0.880
TRIUR3_04556 Triticum urartu TRIUR3_04556 I 0.878
Eucgr.A02028 Eucalyptus grandis Eucgr.A02028 N 0.877
PK01104.1 Cannabis sativa PK01104.1 I 0.877
BRADI3G37067 Brachypodium distachyon BRADI3G37067 I 0.877
Solyc05g007550.1 Solanum lycopersicum Solyc05g007550.1 I 0.877
Lus10015367.g Linum usitatissimum Lus10015367.g I 0.877
Lus10007263.g Linum usitatissimum Lus10007263.g I 0.876
Eucgr.I01940 Eucalyptus grandis Eucgr.I01940 I 0.876
Ciclev10031623m.g Citrus clementina Ciclev10031623m.g I 0.876
29813.m001479 Ricinus communis 29813.m001479 I 0.876
Aquca_002_00586 Aquilegia coerulea Aquca_002_00586 I 0.876
GSMUA_Achr6G02680_001 Musa acuminata GSMUA_Achr6G02680_001 I 0.876
GLYMA18G15020 Glycine max GLYMA18G15020 I 0.876
cassava38350.m1 Manihot esculenta cassava38350.m1 I 0.876
GLYMA08G41260 Glycine max GLYMA08G41260 I 0.876
orange1.1g015827m.g Citrus sinensis orange1.1g015827m.g I 0.876
Cucsa.285120 Cucumis sativus Cucsa.285120 I 0.875
29032.m000021 Ricinus communis 29032.m000021 I 0.875
Gorai.004G270400 Gossypium raimondii Gorai.004G270400 I 0.875
POPTR_0005s22710 Populus trichocarpa POPTR_0005s22710 I 0.875
Aquca_026_00367 Aquilegia coerulea Aquca_026_00367 I 0.875
Traes_2BS_3B6ABF5E6 Triticum aestivum Traes_2BS_3B6ABF5E6 I 0.874
Gorai.005G141200 Gossypium raimondii Gorai.005G141200 I 0.874
Traes_5BL_2131D2B17 Triticum aestivum Traes_5BL_2131D2B17 I 0.874
POPTR_0002s05820 Populus trichocarpa POPTR_0002s05820 I 0.874
GLYMA19G02580 Glycine max GLYMA19G02580 I 0.873
GLYMA13G05350 Glycine max GLYMA13G05350 I 0.873
cassava45330.m1 Manihot esculenta cassava45330.m1 I 0.873
GSMUA_Achr10G08420_001 Musa acuminata GSMUA_Achr10G08420_001 N 0.872
orange1.1g047852m.g Citrus sinensis orange1.1g047852m.g I 0.872
Ca_18749 Cicer arietinum Ca_18749 I 0.872
Gorai.009G357700 Gossypium raimondii Gorai.009G357700 I 0.871
MDP0000186765 Malus domestica MDP0000186765 I 0.871
Gorai.006G017700 Gossypium raimondii Gorai.006G017700 I 0.871
anac094 Vitis vinifera VIT_14s0108g00860 I 0.871
Eucgr.G02506 Eucalyptus grandis Eucgr.G02506 I 0.871
MDP0000241821 Malus domestica MDP0000241821 I 0.871
SapurV1A.0552s0060 Salix purpurea SapurV1A.0552s0060 I 0.871
evm.TU.supercontig_128.20 Carica papaya evm.TU.supercontig_128.20 I 0.871