CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo5g002810
(
Brassica oleracea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bo5g002810
T292389_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.933
0.509
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo5g002810.1
NAC/NAM
4
149
IVGFGFRPTDEELVGYYLHNKILGQNWLVQEFISEVNISDFDPWNLRSSLGVSLSVSLSVQSKVKSRDLVWYFFSRRDANGDRQNRRTSSGFWKITGDPVDVKDQWGTWCGFAGKIGYKKVLVFRMGRSSSSQSPKSDWVIHEYHY
Links
Other
NAC/NAM
family TFs
Other
Brassica oleracea
TFs
185 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo5g002850
Brassica oleracea
Bo5g002850
I
0.989
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
0.980
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
0.980
ANAC001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000119
I
0.977
Carubv10009451m.g
Capsella rubella
Carubv10009451m.g
I
0.977
Thhalv10007665m.g
Eutrema salsugineum
Thhalv10007665m.g
I
0.977
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
0.970
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
0.961
Pm028711
Prunus mume
Pm028711
I
0.960
Bostr.25375s0002
Boechera stricta
Bostr.25375s0002
I
0.954
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
0.942
Bo9g004070
Brassica oleracea
Bo9g004070
I
0.941
Ca_20988
Cicer arietinum
Ca_20988
I
0.939
PRUPE_ppb017658mg
Prunus persica
PRUPE_ppb017658mg
I
0.938
Bra036328
Brassica rapa
Bra036328
I
0.937
Bra033296
Brassica rapa
Bra033296
I
0.937
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
0.934
NAC69
Arabidopsis thaliana
AT4G01550
D
0.933
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
0.933
VIT_15s0048g02320
Vitis vinifera
VIT_15s0048g02320
I
0.931
Bostr.5325s0011
Boechera stricta
Bostr.5325s0011
I
0.931
Bra027596
Brassica rapa
Bra027596
I
0.930
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
0.928
Bo9g004090
Brassica oleracea
Bo9g004090
I
0.927
Bo6g119080
Brassica oleracea
Bo6g119080
I
0.927
Solyc08g074300.2
Solanum lycopersicum
Solyc08g074300.2
I
0.927
MDP0000282616
Malus domestica
MDP0000282616
I
0.924
PGSC0003DMG400029593
Solanum tuberosum
PGSC0003DMG400029593
I
0.924
mgf022344m
Mimulus guttatus
mgf022344m
I
0.920
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
0.920
PRUPE_ppa022384mg
Prunus persica
PRUPE_ppa022384mg
I
0.919
GSMUA_Achr4G32010_001
Musa acuminata
GSMUA_Achr4G32010_001
I
0.918
GSMUA_Achr6G31580_001
Musa acuminata
GSMUA_Achr6G31580_001
I
0.918
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
0.918
Bo5g002830
Brassica oleracea
Bo5g002830
N
0.917
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
0.913
Bostr.0556s0555
Boechera stricta
Bostr.0556s0555
I
0.912
VIT_15s0048g02300
Vitis vinifera
VIT_15s0048g02300
N
0.912
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
0.910
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
0.909
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
0.909
VIT_19s0027g00840
Vitis vinifera
VIT_19s0027g00840
I
0.909
GRMZM2G003715
Zea mays
GRMZM2G003715
I
0.907
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
0.907
MLOC_13932
Hordeum vulgare
MLOC_13932
I
0.906
Thhalv10028684m.g
Eutrema salsugineum
Thhalv10028684m.g
I
0.906
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
0.906
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
0.905
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
0.905
PRUPE_ppa017765mg
Prunus persica
PRUPE_ppa017765mg
I
0.904
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
0.904
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
0.904
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
0.904
OS08G0511200
Oryza sativa
OS08G0511200
I
0.904
fgenesh1_pg.C_scaffold_3000386
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000386
I
0.903
MTR_1g008740
Medicago truncatula
MTR_1g008740
I
0.902
Bo5g002860
Brassica oleracea
Bo5g002860
N
0.902
Bra008553
Brassica rapa
Bra008553
I
0.901
GRMZM2G139700
Zea mays
GRMZM2G139700
I
0.901
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
0.900
MDP0000136652
Malus domestica
MDP0000136652
N
0.900
Bo9g061230
Brassica oleracea
Bo9g061230
I
0.900
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
0.900
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
0.900
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
0.900
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
0.900
MDP0000182344
Malus domestica
MDP0000182344
N
0.900
Bo9g004110
Brassica oleracea
Bo9g004110
I
0.900
MLOC_37843
Hordeum vulgare
MLOC_37843
I
0.900
e_gw1.259.32.1
Physcomitrella patens
e_gw1.259.32.1
I
0.899
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
0.899
BRADI4G37327
Brachypodium distachyon
BRADI4G37327
I
0.898
Bo00853s060
Brassica oleracea
Bo00853s060
I
0.898
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
0.898
PRUPE_ppa016876mg
Prunus persica
PRUPE_ppa016876mg
N
0.897
Pm028712
Prunus mume
Pm028712
N
0.897
VIT_19s0027g00910
Vitis vinifera
VIT_19s0027g00910
I
0.896
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
0.895
OMERI08G03500
Oryza meridionalis
OMERI08G03500
I
0.895
ORGLA08G0029000
Oryza glaberrima
ORGLA08G0029000
I
0.895
OLONG_000105
Oryza longistaminata
OLONG_000105
I
0.895
OBART08G03460
Oryza barthii
OBART08G03460
I
0.895
Eucgr.F01463
Eucalyptus grandis
Eucgr.F01463
I
0.895
OGLUM08G03540
Oryza glumaepatula
OGLUM08G03540
I
0.895
OPUNC08G03310
Oryza punctata
OPUNC08G03310
I
0.895
OB08G13730
Oryza brachyantha
OB08G13730
I
0.895
F775_13961
Aegilops tauschii
F775_13961
I
0.894
LPERR08G03510
Leersia perrieri
LPERR08G03510
I
0.893
TRIUR3_32613
Triticum urartu
TRIUR3_32613
I
0.892
F775_30082
Aegilops tauschii
F775_30082
I
0.892
BRADI3G16480
Brachypodium distachyon
BRADI3G16480
I
0.892
Traes_7BL_0C386426A
Triticum aestivum
Traes_7BL_0C386426A
I
0.892
MLOC_50406
Hordeum vulgare
MLOC_50406
I
0.892
Traes_7AL_669D4AE47
Triticum aestivum
Traes_7AL_669D4AE47
I
0.892
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
0.892
Sb02g026510
Sorghum bicolor
Sb02g026510
I
0.892
Traes_7DL_AB67A0B36
Triticum aestivum
Traes_7DL_AB67A0B36
I
0.892
Si010553m.g
Setaria italica
Si010553m.g
I
0.891
Si013369m.g
Setaria italica
Si013369m.g
I
0.890
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
0.890
F775_20638
Aegilops tauschii
F775_20638
I
0.890
MLOC_65286
Hordeum vulgare
MLOC_65286
I
0.890
Bostr.15697s0466
Boechera stricta
Bostr.15697s0466
N
0.889
BGIOSGA016546
Oryza indica
BGIOSGA016546
I
0.889
SapurV1A.0076s0070
Salix purpurea
SapurV1A.0076s0070
I
0.889
ONIVA04G13100
Oryza nivara
ONIVA04G13100
I
0.889
ORGLA04G0119700
Oryza glaberrima
ORGLA04G0119700
I
0.889
OGLUM04G14830
Oryza glumaepatula
OGLUM04G14830
I
0.889
ORUFI04G16370
Oryza rufipogon
ORUFI04G16370
I
0.889
OBART04G14970
Oryza barthii
OBART04G14970
I
0.889
OS04G0460600
Oryza sativa
OS04G0460600
I
0.889
Solyc11g068750.1
Solanum lycopersicum
Solyc11g068750.1
I
0.888
PGSC0003DMG400019615
Solanum tuberosum
PGSC0003DMG400019615
I
0.888
Pavir.Fa01901
Panicum virgatum
Pavir.Fa01901
I
0.888
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
0.888
Bra036326
Brassica rapa
Bra036326
I
0.888
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
0.888
BRADI1G52480
Brachypodium distachyon
BRADI1G52480
N
0.887
Sb07g003900
Sorghum bicolor
Sb07g003900
I
0.887
PGSC0003DMG400039898
Solanum tuberosum
PGSC0003DMG400039898
I
0.886
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
0.886
Cla023594
Citrullus lanatus
Cla023594
I
0.885
Pavir.Gb01850
Panicum virgatum
Pavir.Gb01850
I
0.885
OS08G0157900
Oryza sativa
OS08G0157900
I
0.884
ONIVA08G03440
Oryza nivara
ONIVA08G03440
I
0.884
ORUFI08G03870
Oryza rufipogon
ORUFI08G03870
I
0.884
Sb02g032230
Sorghum bicolor
Sb02g032230
I
0.884
Si022714m.g
Setaria italica
Si022714m.g
I
0.884
BGIOSGA027623
Oryza indica
BGIOSGA027623
I
0.884
PGSC0003DMG400009920
Solanum tuberosum
PGSC0003DMG400009920
I
0.883
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
0.883
Sb06g019010
Sorghum bicolor
Sb06g019010
I
0.883
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
0.883
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
0.883
Pavir.Fb00405
Panicum virgatum
Pavir.Fb00405
I
0.882
Si032702m.g
Setaria italica
Si032702m.g
I
0.882
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
0.882
Solyc06g074170.2
Solanum lycopersicum
Solyc06g074170.2
I
0.882
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
0.882
OB09G25590
Oryza brachyantha
OB09G25590
I
0.882
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
0.882
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
0.882
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
0.882
Ca_13571
Cicer arietinum
Ca_13571
I
0.881
PGSC0003DMG400005892
Solanum tuberosum
PGSC0003DMG400005892
I
0.881
MTR_8g023880
Medicago truncatula
MTR_8g023880
N
0.881
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
0.880
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
0.880
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
0.879
MTR_8g023930
Medicago truncatula
MTR_8g023930
I
0.878
OLONG_008218
Oryza longistaminata
OLONG_008218
I
0.878
MDP0000575835
Malus domestica
MDP0000575835
I
0.877
LPERR04G11740
Leersia perrieri
LPERR04G11740
I
0.877
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
0.877
OPUNC06G00030
Oryza punctata
OPUNC06G00030
N
0.875
GSMUA_Achr10G08120_001
Musa acuminata
GSMUA_Achr10G08120_001
I
0.875
Sb08g022560
Sorghum bicolor
Sb08g022560
I
0.875
GSMUA_Achr1G03560_001
Musa acuminata
GSMUA_Achr1G03560_001
I
0.874
Carubv10014270m.g
Capsella rubella
Carubv10014270m.g
I
0.874
Gorai.005G088800
Gossypium raimondii
Gorai.005G088800
I
0.874
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
0.874
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
0.874
Cagra.5641s0055
Capsella grandiflora
Cagra.5641s0055
I
0.874
OLONG_023103
Oryza longistaminata
OLONG_023103
I
0.873
OGLUM06G00040
Oryza glumaepatula
OGLUM06G00040
N
0.873
OBART06G00060
Oryza barthii
OBART06G00060
N
0.873
OLONG_004904
Oryza longistaminata
OLONG_004904
N
0.873
ORUFI06G00070
Oryza rufipogon
ORUFI06G00070
N
0.873
ATAF1
Arabidopsis lyrata
scaffold_100066.1
I
0.873
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
0.873
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
0.873
ONIVA06G00080
Oryza nivara
ONIVA06G00080
N
0.873
OS06G0101800
Oryza sativa
OS06G0101800
N
0.873
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
0.873
BGIOSGA022116
Oryza indica
BGIOSGA022116
N
0.873
ORGLA06G0000500
Oryza glaberrima
ORGLA06G0000500
N
0.873
Pavir.Ia03443
Panicum virgatum
Pavir.Ia03443
I
0.872
POPTR_0014s10330
Populus trichocarpa
POPTR_0014s10330
I
0.872
Bo1g138800
Brassica oleracea
Bo1g138800
I
0.872
Bra039353
Brassica rapa
Bra039353
I
0.872
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
0.871
cassava29774.valid.m1
Manihot esculenta
cassava29774.valid.m1
I
0.871
cassava29775.valid.m1
Manihot esculenta
cassava29775.valid.m1
I
0.871
mgf013201m
Mimulus guttatus
mgf013201m
I
0.871
Cagra.27691s0001
Capsella grandiflora
Cagra.27691s0001
I
0.871