Bo5g002960 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g002960 T292401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.875 0.593
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.875 0.593
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g002960.1 NAC/NAM 4 133

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008898 Ricinus communis 30174.m008898 I 0.000
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.000
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.000
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.000
Aquca_013_00580 Aquilegia coerulea Aquca_013_00580 I 0.000
LBD18 Arabidopsis thaliana AT2G45420 D 0.000
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.000
BGIOSGA032254 Oryza indica BGIOSGA032254 I 0.000
Bo4g024620 Brassica oleracea Bo4g024620 I 0.000
Bo4g195520 Brassica oleracea Bo4g195520 I 0.000
Bostr.25993s0233 Boechera stricta Bostr.25993s0233 I 0.000
Bra004910 Brassica rapa Bra004910 I 0.000
Bra040311 Brassica rapa Bra040311 I 0.000
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.000
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I 0.000
Cagra.0698s0021 Capsella grandiflora Cagra.0698s0021 I 0.000
Carubv10025050m.g Capsella rubella Carubv10025050m.g I 0.000
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.000
cassava28672.m1 Manihot esculenta cassava28672.m1 I 0.000
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.000
Ca_20428 Cicer arietinum Ca_20428 I 0.000
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.000
Cla007068 Citrullus lanatus Cla007068 I 0.000
Cla007069 Citrullus lanatus Cla007069 I 0.000
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.000
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.000
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I 0.000
LBD18 Arabidopsis lyrata fgenesh2_kg.4__2737__AT2G45420.1 I 0.000
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I 0.000
gene19356-v1.0-hybrid Fragaria vesca gene19356-v1.0-hybrid I 0.000
GLYMA01G34523 Glycine max GLYMA01G34523 I 0.000
GLYMA01G34540 Glycine max GLYMA01G34540 I 0.000
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.000
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.000
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.000
GRMZM2G076327 Zea mays GRMZM2G076327 I 0.000
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.000
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.000
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.000
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.000
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.000
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.000
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I 0.000
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.000
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.000
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.000
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.000
MDP0000429067 Malus domestica MDP0000429067 I 0.000
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.000
MTR_8g036105 Medicago truncatula MTR_8g036105 I 0.000
OB10G12360 Oryza brachyantha OB10G12360 I 0.000
OBART03G10450 Oryza barthii OBART03G10450 I 0.000
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.000
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I 0.000
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.000
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.000
ONIVA10G03250 Oryza nivara ONIVA10G03250 I 0.000
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.000
OPUNC10G02630 Oryza punctata OPUNC10G02630 I 0.000
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.000
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.000
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I 0.000
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.000
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I 0.000
OS03G0246900 Oryza sativa OS03G0246900 I 0.000
OS10G0162600 Oryza sativa OS10G0162600 I 0.000
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I 0.000
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I 0.000
Pavir.Ib02517 Panicum virgatum Pavir.Ib02517 I 0.000
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.000
PK23185.1 Cannabis sativa PK23185.1 I 0.000
PK25573.1 Cannabis sativa PK25573.1 I 0.000
Pm017935 Prunus mume Pm017935 I 0.000
Pm017936 Prunus mume Pm017936 I 0.000
POPTR_0014s06580 Populus trichocarpa POPTR_0014s06580 I 0.000
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.000
PRUPE_ppa017589mg Prunus persica PRUPE_ppa017589mg I 0.000
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.000
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I 0.000
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.000
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.000
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.000
TCM_005497 Theobroma cacao TCM_005497 I 0.000
Thhalv10001791m.g Eutrema salsugineum Thhalv10001791m.g I 0.000
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.000
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I 0.000
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.000
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.000
VIT_15s0048g00840 Vitis vinifera VIT_15s0048g00840 I 0.000