Bo5g002960 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g002960 T292401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.875 0.593
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.875 0.593
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g002960.1 NAC/NAM 4 133

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04400 Aegilops tauschii F775_04400 N 0.000
BBA_01545 Beauveria bassiana BBA_01545 N 0.000
BRADI5G00630 Brachypodium distachyon BRADI5G00630 N 0.000
MLOC_12524 Hordeum vulgare MLOC_12524 N 0.000
LPERR04G01540 Leersia perrieri LPERR04G01540 N 0.000
OB04G11920 Oryza brachyantha OB04G11920 N 0.000
OGLUM04G01970 Oryza glumaepatula OGLUM04G01970 N 0.000
BGIOSGA015617 Oryza indica BGIOSGA015617 N 0.000
OMERI04G02470 Oryza meridionalis OMERI04G02470 N 0.000
ONIVA08G18490 Oryza nivara ONIVA08G18490 N 0.000
OPUNC04G02270 Oryza punctata OPUNC04G02270 N 0.000
ORUFI04G03050 Oryza rufipogon ORUFI04G03050 N 0.000
OS04G0166400 Oryza sativa OS04G0166400 N 0.000
Si012339m.g Setaria italica Si012339m.g N 0.000
Si038535m.g Setaria italica Si038535m.g N 0.000
Sb06g001680 Sorghum bicolor Sb06g001680 N 0.000
Traes_2AS_6F531FBB5 Triticum aestivum Traes_2AS_6F531FBB5 N 0.000
Traes_2BS_1E88E202F Triticum aestivum Traes_2BS_1E88E202F N 0.000
GRMZM2G424651 Zea mays GRMZM2G424651 N 0.000