Bo5g133050 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g133050 T292417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G12910
M07204_2.00
Arabidopsis thaliana
YGSCGKNDNDDHNMCGB

VCGKNDHHNHNMCGSCR
Dap-seq
OMalley et al.(2016)
AT3G12910_col_a
0.990 0.887
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.904 0.548
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.904 0.548
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.904 0.548
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.902 0.539
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g133050.1 NAC/NAM 25 222

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Minc02822 Meloidogyne incognita Minc02822 N 0.000
Minc06656 Meloidogyne incognita Minc06656 N 0.000
Minc11357 Meloidogyne incognita Minc11357 N 0.000
Minc11359 Meloidogyne incognita Minc11359 N 0.000
Minc11361 Meloidogyne incognita Minc11361 N 0.000
Minc11362 Meloidogyne incognita Minc11362 N 0.000
Minc17472 Meloidogyne incognita Minc17472 N 0.000
Minc18240 Meloidogyne incognita Minc18240 N 0.000
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0 N 0.000
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0 N 0.000
augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0 N 0.000
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1 N 0.000
genemark-nMf.1.1.scaf00124-processed-gene-0.5 Meloidogyne floridensis genemark-nMf.1.1.scaf00124-processed-gene-0.5 N 0.000
maker-nMf.1.1.scaf03855-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf03855-augustus-gene-0.7 N 0.000
maker-nMf.1.1.scaf08489-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf08489-snap-gene-0.4 N 0.000
maker-nMf.1.1.scaf08516-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf08516-augustus-gene-0.5 N 0.000
maker-nMf.1.1.scaf11243-snap-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf11243-snap-gene-0.6 N 0.000
Minc06648 Meloidogyne incognita Minc06648 N 0.000
Minc05955 Meloidogyne incognita Minc05955 N 0.000
Minc03112 Meloidogyne incognita Minc03112 N 0.000
Minc03113 Meloidogyne incognita Minc03113 N 0.000
Minc03116 Meloidogyne incognita Minc03116 N 0.000
Minc03122 Meloidogyne incognita Minc03122 N 0.000
Minc03124 Meloidogyne incognita Minc03124 N 0.000
Minc03125 Meloidogyne incognita Minc03125 N 0.000
Minc03951 Meloidogyne incognita Minc03951 N 0.000
Minc04628 Meloidogyne incognita Minc04628 N 0.000
Minc04734 Meloidogyne incognita Minc04734 N 0.000
Minc04767 Meloidogyne incognita Minc04767 N 0.000
Minc05938 Meloidogyne incognita Minc05938 N 0.000
Minc05939 Meloidogyne incognita Minc05939 N 0.000
Minc05941 Meloidogyne incognita Minc05941 N 0.000
Minc05944 Meloidogyne incognita Minc05944 N 0.000
Minc05948 Meloidogyne incognita Minc05948 N 0.000
Minc05953 Meloidogyne incognita Minc05953 N 0.000
MhA1_Contig311.frz3.gene3 Meloidogyne hapla MhA1_Contig311.frz3.gene3 N 0.000