Bo5g148430 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g148430 T292420_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac046
M00884_2.00
Arabidopsis thaliana
NHMCGCMABNN

NNVTKGCGKDN
PBM
Franco-Zorrilla et al.(2014)
ANAC46
0.966 0.947
anac046
M07196_2.00
Arabidopsis thaliana
CKTSHNNHWCAMGYHAH

DTDRCKTGWDNNDSAMG
Dap-seq
OMalley et al.(2016)
ANAC046_colamp_a
0.966 0.947
anac046
M07197_2.00
Arabidopsis thaliana
NNTWNCKTGTNNNDCAMGYHA

TDRCKTGHNNNACAMGNWANN
Dap-seq
OMalley et al.(2016)
ANAC046_col
0.966 0.947
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB

VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.936 0.895
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA

TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.936 0.895
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g148430.1 NAC/NAM 21 146

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra031950 Brassica rapa Bra031950 I 0.971
Thhalv10021125m.g Eutrema salsugineum Thhalv10021125m.g I 0.969
anac046 Arabidopsis lyrata fgenesh2_kg.3__366__AT3G04060.1 I 0.968
Bostr.2570s0302 Boechera stricta Bostr.2570s0302 I 0.968
anac046 Arabidopsis thaliana AT3G04060 D 0.966
Cagra.2026s0002 Capsella grandiflora Cagra.2026s0002 I 0.964
Carubv10014118m.g Capsella rubella Carubv10014118m.g I 0.964
Bo1g152230 Brassica oleracea Bo1g152230 I 0.957
Bra040153 Brassica rapa Bra040153 I 0.956
cassava25877.m1 Manihot esculenta cassava25877.m1 I 0.937
cassava35698.valid.m1 Manihot esculenta cassava35698.valid.m1 I 0.937
ANAC087 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001462 I 0.936
ANAC087 Arabidopsis thaliana AT5G18270 D 0.936
Carubv10001373m.g Capsella rubella Carubv10001373m.g I 0.935
Cagra.0906s0022 Capsella grandiflora Cagra.0906s0022 I 0.935
Thhalv10014060m.g Eutrema salsugineum Thhalv10014060m.g I 0.934
Bostr.26527s0381 Boechera stricta Bostr.26527s0381 I 0.934
Gorai.007G267700 Gossypium raimondii Gorai.007G267700 I 0.933
TCM_026028 Theobroma cacao TCM_026028 I 0.933
Bo2g015440 Brassica oleracea Bo2g015440 I 0.932
Bra023669 Brassica rapa Bra023669 I 0.932
Bra006449 Brassica rapa Bra006449 I 0.932
Bo3g013050 Brassica oleracea Bo3g013050 I 0.932
29950.m001171 Ricinus communis 29950.m001171 I 0.932
Gorai.013G118000 Gossypium raimondii Gorai.013G118000 I 0.932
Lus10026879.g Linum usitatissimum Lus10026879.g I 0.928
VIT_08s0007g07640 Vitis vinifera VIT_08s0007g07640 I 0.926
POPTR_0013s05110 Populus trichocarpa POPTR_0013s05110 I 0.925
Lus10003435.g Linum usitatissimum Lus10003435.g I 0.924
SapurV1A.1196s0010 Salix purpurea SapurV1A.1196s0010 I 0.919
evm.TU.supercontig_594.1 Carica papaya evm.TU.supercontig_594.1 I 0.919
SapurV1A.0867s0130 Salix purpurea SapurV1A.0867s0130 I 0.919
POPTR_0019s04710 Populus trichocarpa POPTR_0019s04710 I 0.907
GLYMA16G26810 Glycine max GLYMA16G26810 I 0.904
GLYMA02G07760 Glycine max GLYMA02G07760 I 0.904
MDP0000184069 Malus domestica MDP0000184069 I 0.903
SapurV1A.2283s0010 Salix purpurea SapurV1A.2283s0010 I 0.901
SapurV1A.0308s0280 Salix purpurea SapurV1A.0308s0280 I 0.901
orange1.1g016542m.g Citrus sinensis orange1.1g016542m.g I 0.896
Ciclev10020549m.g Citrus clementina Ciclev10020549m.g I 0.896
PRUPE_ppa005770mg Prunus persica PRUPE_ppa005770mg I 0.896
Cucsa.002980 Cucumis sativus Cucsa.002980 I 0.892
GSMUA_Achr5G07600_001 Musa acuminata GSMUA_Achr5G07600_001 I 0.888
Pm025307 Prunus mume Pm025307 I 0.887
Cla012339 Citrullus lanatus Cla012339 I 0.887
chr1.CM0104.260.nc Lotus japonicus chr1.CM0104.260.nc I 0.886
Ca_08255 Cicer arietinum Ca_08255 I 0.886
Aquca_014_00944 Aquilegia coerulea Aquca_014_00944 I 0.885
GLYMA19G28515 Glycine max GLYMA19G28515 I 0.885
Ca_19144 Cicer arietinum Ca_19144 I 0.882
Bra036223 Brassica rapa Bra036223 I 0.882
GLYMA16G04720 Glycine max GLYMA16G04720 I 0.881
gene20686-v1.0-hybrid Fragaria vesca gene20686-v1.0-hybrid I 0.874
GSMUA_Achr6G08600_001 Musa acuminata GSMUA_Achr6G08600_001 I 0.874