Bo6g036040 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo6g036040 T292424_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY

RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.965 0.956
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA

TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.954 0.816
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW

WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.945 0.825
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH

DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.931 0.719
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD

HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.931 0.719
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.925 0.798
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.925 0.798
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.906 0.702
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.906 0.702
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g036040.1 NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla023001 Citrullus lanatus Cla023001 N 0.000
Cucsa.089670 Cucumis sativus Cucsa.089670 N 0.000
Eucgr.J00892 Eucalyptus grandis Eucgr.J00892 N 0.000
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.000
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.000
LjSGA_067208.1 Lotus japonicus LjSGA_067208.1 N 0.000
mgf024109m Mimulus guttatus mgf024109m N 0.000
mgf026463m Mimulus guttatus mgf026463m N 0.000
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.000
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.000
PDK_20s1675721g001 Phoenix dactylifera PDK_20s1675721g001 N 0.000
Pm005451 Prunus mume Pm005451 N 0.000
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.000
TCM_021433 Theobroma cacao TCM_021433 I 0.000
Traes_2DL_304E62CCE Triticum aestivum Traes_2DL_304E62CCE N 0.000
Traes_5AL_D1807A4E0 Triticum aestivum Traes_5AL_D1807A4E0 N 0.000