Bo7g057730 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo7g057730 T292445_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANAC13
M07170_2.00
Arabidopsis thaliana
TDNCTTGYYNNNCAAG

CTTGNNNRRCAAGNHA
Dap-seq
OMalley et al.(2016)
ANAC013_col_a
0.932 0.877
ANAC13
M07171_2.00
Arabidopsis thaliana
CTTGYBHNNCAAGNHAH

DTDNCTTGNNDVRCAAG
Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a
0.932 0.877
ANAC13
M11077_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANAC013_Q2
0.932 0.877
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g057730.1 NAC/NAM 46 171

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra012342 Brassica rapa Bra012342 I 0.960
Carubv10008817m.g Capsella rubella Carubv10008817m.g I 0.936
Cagra.1443s0015 Capsella grandiflora Cagra.1443s0015 I 0.933
ANAC13 Arabidopsis thaliana AT1G32870 D 0.932
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I 0.927
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I 0.926
Thhalv10007369m.g Eutrema salsugineum Thhalv10007369m.g I 0.912
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.901
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.899
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.897
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I 0.880
Cla013854 Citrullus lanatus Cla013854 I 0.878
SapurV1A.0348s0040 Salix purpurea SapurV1A.0348s0040 I 0.878
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I 0.871