Bo9g004070 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo9g004070 T292470_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.983 0.704
NAC68
M07214_2.00
Arabidopsis thaliana
RCTTVYNBNNYAAGY

RCTTRNNVNRBAAGY
Dap-seq
OMalley et al.(2016)
NTM1_col_a
0.873 0.635
NAC68
M07215_2.00
Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN

NNNDRDRDNNAAAAAGYRRHD
Dap-seq
OMalley et al.(2016)
NTM1_colamp_a
0.873 0.635
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g004070.1 NAC/NAM 5 136

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra036328 Brassica rapa Bra036328 I 0.994
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.987
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.983
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.983
NAC69 Arabidopsis thaliana AT4G01550 D 0.983
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.979
Bra008553 Brassica rapa Bra008553 I 0.977
Bo00853s060 Brassica oleracea Bo00853s060 I 0.974
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.972
Bra027596 Brassica rapa Bra027596 I 0.968
Bo9g004110 Brassica oleracea Bo9g004110 I 0.961
Bo6g119080 Brassica oleracea Bo6g119080 I 0.961
Bo9g004090 Brassica oleracea Bo9g004090 I 0.961
MDP0000282616 Malus domestica MDP0000282616 I 0.957
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I 0.956
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.956
Bra036326 Brassica rapa Bra036326 I 0.952
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.950
Bo5g002850 Brassica oleracea Bo5g002850 I 0.946
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.945
mgf022344m Mimulus guttatus mgf022344m I 0.943
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.942
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.942
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.942
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.941
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.941
Bo5g002810 Brassica oleracea Bo5g002810 I 0.941
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.940
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.939
OS08G0157900 Oryza sativa OS08G0157900 I 0.939
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.939
Ca_20988 Cicer arietinum Ca_20988 I 0.939
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.939
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.938
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.937
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.935
Bo9g061230 Brassica oleracea Bo9g061230 I 0.934
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I 0.931
OB08G13730 Oryza brachyantha OB08G13730 I 0.931
Bra033296 Brassica rapa Bra033296 I 0.931
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.930
OGLUM08G03540 Oryza glumaepatula OGLUM08G03540 I 0.930
OBART08G03460 Oryza barthii OBART08G03460 I 0.930
OMERI08G03500 Oryza meridionalis OMERI08G03500 I 0.930
OLONG_000105 Oryza longistaminata OLONG_000105 I 0.930
OPUNC08G03310 Oryza punctata OPUNC08G03310 I 0.930
ORGLA08G0029000 Oryza glaberrima ORGLA08G0029000 I 0.930
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.929
MDP0000575835 Malus domestica MDP0000575835 I 0.929
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.928
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.928
F775_30082 Aegilops tauschii F775_30082 I 0.925
Traes_7BL_0C386426A Triticum aestivum Traes_7BL_0C386426A I 0.925
Traes_7AL_669D4AE47 Triticum aestivum Traes_7AL_669D4AE47 I 0.925
Traes_7DL_AB67A0B36 Triticum aestivum Traes_7DL_AB67A0B36 I 0.925
TRIUR3_32613 Triticum urartu TRIUR3_32613 I 0.925
MLOC_50406 Hordeum vulgare MLOC_50406 I 0.925
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.924
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.924
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I 0.924
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I 0.924
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.924
Pm028711 Prunus mume Pm028711 I 0.924
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.924
Lus10032919.g Linum usitatissimum Lus10032919.g I 0.924
GLYMA14G36840 Glycine max GLYMA14G36840 I 0.923
LPERR08G03510 Leersia perrieri LPERR08G03510 I 0.923
BRADI3G16480 Brachypodium distachyon BRADI3G16480 I 0.922
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I 0.922
AMTR_s00018p00074980 Amborella trichopoda AMTR_s00018p00074980 I 0.921
Pm019659 Prunus mume Pm019659 I 0.920
Pavir.Fa01901 Panicum virgatum Pavir.Fa01901 I 0.920
Ca_27204 Cicer arietinum Ca_27204 I 0.920
TCM_015535 Theobroma cacao TCM_015535 I 0.920
Si013369m.g Setaria italica Si013369m.g I 0.920
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.919
MDP0000231843 Malus domestica MDP0000231843 I 0.919
GSMUA_Achr3G00330_001 Musa acuminata GSMUA_Achr3G00330_001 I 0.919
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.919
Sb07g003900 Sorghum bicolor Sb07g003900 I 0.919
GSMUA_Achr1G03560_001 Musa acuminata GSMUA_Achr1G03560_001 I 0.917
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I 0.917
Bo9g004100 Brassica oleracea Bo9g004100 I 0.916
Bra036327 Brassica rapa Bra036327 I 0.916
Si032702m.g Setaria italica Si032702m.g I 0.916
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.916
MTR_8g023930 Medicago truncatula MTR_8g023930 I 0.915
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.914
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.913
Pm028722 Prunus mume Pm028722 I 0.913
MDP0000214515 Malus domestica MDP0000214515 I 0.913
MTR_5g069030 Medicago truncatula MTR_5g069030 I 0.912
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.912
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.912
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.912
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.912
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.911
OB09G25590 Oryza brachyantha OB09G25590 I 0.911
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.911
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.911
Lus10015587.g Linum usitatissimum Lus10015587.g I 0.911
mgf015836m Mimulus guttatus mgf015836m I 0.911
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N 0.911
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.911
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.911
Ca_04069 Cicer arietinum Ca_04069 I 0.909
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.908
MTR_3g093050 Medicago truncatula MTR_3g093050 I 0.908
Bostr.5325s0011 Boechera stricta Bostr.5325s0011 I 0.907
Gorai.007G017500 Gossypium raimondii Gorai.007G017500 I 0.907
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.907
F775_13961 Aegilops tauschii F775_13961 I 0.906
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.906
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I 0.906
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.905
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.905
GLYMA12G31211 Glycine max GLYMA12G31211 I 0.905
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.905
anac067 Arabidopsis thaliana AT4G01520 I 0.904
Bo5g002860 Brassica oleracea Bo5g002860 N 0.904
VIT_15s0048g02320 Vitis vinifera VIT_15s0048g02320 I 0.904
chr1.LjT41E18.160.nc Lotus japonicus chr1.LjT41E18.160.nc I 0.903
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I 0.898
GSMUA_Achr2G11810_001 Musa acuminata GSMUA_Achr2G11810_001 I 0.898
GSMUA_Achr4G29170_001 Musa acuminata GSMUA_Achr4G29170_001 I 0.898
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.897
Solyc08g074300.2 Solanum lycopersicum Solyc08g074300.2 I 0.897
fgenesh1_pg.scaffold_182000024 Physcomitrella patens fgenesh1_pg.scaffold_182000024 I 0.897
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.896
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.896
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.896
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.896
VIT_15s0048g02300 Vitis vinifera VIT_15s0048g02300 N 0.895
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I 0.894
Pm018442 Prunus mume Pm018442 N 0.894
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.894
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.893
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.892
PGSC0003DMG400019615 Solanum tuberosum PGSC0003DMG400019615 I 0.891
PGSC0003DMG400029593 Solanum tuberosum PGSC0003DMG400029593 I 0.891
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.891
Solyc11g068750.1 Solanum lycopersicum Solyc11g068750.1 I 0.891
AMTR_s00022p00160350 Amborella trichopoda AMTR_s00022p00160350 I 0.890
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.890
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.890
MDP0000136652 Malus domestica MDP0000136652 N 0.889
MDP0000182344 Malus domestica MDP0000182344 N 0.889
MDP0000311190 Malus domestica MDP0000311190 I 0.888
gene23394-v1.0-hybrid Fragaria vesca gene23394-v1.0-hybrid N 0.888
Si022714m.g Setaria italica Si022714m.g I 0.887
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.886
OPUNC04G28220 Oryza punctata OPUNC04G28220 I 0.886
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.886
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.886
Sb02g026510 Sorghum bicolor Sb02g026510 I 0.885
gw1.6.394.1 Physcomitrella patens gw1.6.394.1 I 0.884
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.882
GRMZM2G052239 Zea mays GRMZM2G052239 I 0.882
SELMODRAFT_69090 Selaginella moellendorffii SELMODRAFT_69090 I 0.881
Eucgr.I02571 Eucalyptus grandis Eucgr.I02571 N 0.881
Bo5g002830 Brassica oleracea Bo5g002830 N 0.881
Cla011742 Citrullus lanatus Cla011742 I 0.881
SELMODRAFT_71305 Selaginella moellendorffii SELMODRAFT_71305 I 0.880
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.880
OMERI04G25730 Oryza meridionalis OMERI04G25730 I 0.880
cassava29775.valid.m1 Manihot esculenta cassava29775.valid.m1 I 0.880
cassava29774.valid.m1 Manihot esculenta cassava29774.valid.m1 I 0.880
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I 0.880
NAC026 Arabidopsis thaliana AT1G62700 I 0.879
MTR_8g023880 Medicago truncatula MTR_8g023880 N 0.879
Thhalv10023502m.g Eutrema salsugineum Thhalv10023502m.g I 0.879
gw1.1.690.1 Physcomitrella patens gw1.1.690.1 I 0.877
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.876
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.875
gene35013-v1.0-hybrid Fragaria vesca gene35013-v1.0-hybrid N 0.875
Cagra.0334s0001 Capsella grandiflora Cagra.0334s0001 I 0.875
TCM_020127 Theobroma cacao TCM_020127 N 0.875
ATAF1 Arabidopsis lyrata scaffold_100066.1 I 0.875
SapurV1A.0076s0070 Salix purpurea SapurV1A.0076s0070 I 0.874
TCM_019937 Theobroma cacao TCM_019937 N 0.874
gene35014-v1.0-hybrid Fragaria vesca gene35014-v1.0-hybrid I 0.874
Cla023594 Citrullus lanatus Cla023594 I 0.874
evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N 0.873
MTR_2g068920 Medicago truncatula MTR_2g068920 I 0.873
TCM_020121 Theobroma cacao TCM_020121 I 0.873
PRUPE_ppa023197mg Prunus persica PRUPE_ppa023197mg N 0.873
orange1.1g021772m.g Citrus sinensis orange1.1g021772m.g N 0.873
NAC68 Arabidopsis thaliana AT4G01540 D 0.873
Bostr.0556s0555 Boechera stricta Bostr.0556s0555 I 0.872
Cagra.4003s0027 Capsella grandiflora Cagra.4003s0027 I 0.872
Carubv10026697m.g Capsella rubella Carubv10026697m.g I 0.872
cassava39379.m1 Manihot esculenta cassava39379.m1 N 0.871
SapurV1A.0561s0300 Salix purpurea SapurV1A.0561s0300 N 0.871