Bo9g004110 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo9g004110 T292473_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.967 0.748
NAC68
M07214_2.00
Arabidopsis thaliana
RCTTVYNBNNYAAGY

RCTTRNNVNRBAAGY
Dap-seq
OMalley et al.(2016)
NTM1_col_a
0.909 0.704
NAC68
M07215_2.00
Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN

NNNDRDRDNNAAAAAGYRRHD
Dap-seq
OMalley et al.(2016)
NTM1_colamp_a
0.909 0.704
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g004110.1 NAC/NAM 5 133

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra036326 Brassica rapa Bra036326 I 0.990
Bo00853s060 Brassica oleracea Bo00853s060 I 0.980
Bra008553 Brassica rapa Bra008553 I 0.974
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.974
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.971
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.967
NAC69 Arabidopsis thaliana AT4G01550 D 0.967
Bo9g004090 Brassica oleracea Bo9g004090 I 0.965
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.965
Bo6g119080 Brassica oleracea Bo6g119080 I 0.965
Bra036327 Brassica rapa Bra036327 I 0.964
Bra036328 Brassica rapa Bra036328 I 0.962
Bo9g004070 Brassica oleracea Bo9g004070 I 0.961
Bo9g004100 Brassica oleracea Bo9g004100 I 0.948
anac067 Arabidopsis thaliana AT4G01520 I 0.938
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.933
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.926
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.922
MDP0000282616 Malus domestica MDP0000282616 I 0.918
Bo5g002850 Brassica oleracea Bo5g002850 I 0.913
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.911
NAC68 Arabidopsis thaliana AT4G01540 D 0.909
Ca_20988 Cicer arietinum Ca_20988 I 0.907
MDP0000575835 Malus domestica MDP0000575835 I 0.904
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.904
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.901
Bo5g002810 Brassica oleracea Bo5g002810 I 0.900
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.899
PRUPE_ppa019780mg Prunus persica PRUPE_ppa019780mg N 0.898
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.897
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.895
Bra027596 Brassica rapa Bra027596 I 0.895
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.893
Bo9g061230 Brassica oleracea Bo9g061230 I 0.893
gene35013-v1.0-hybrid Fragaria vesca gene35013-v1.0-hybrid N 0.893
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.892
Eucgr.F01463 Eucalyptus grandis Eucgr.F01463 I 0.892
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.891
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.890
gene35014-v1.0-hybrid Fragaria vesca gene35014-v1.0-hybrid I 0.889
LPERR04G17350 Leersia perrieri LPERR04G17350 I 0.886
Pavir.J31204 Panicum virgatum Pavir.J31204 I 0.886
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.885
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.885
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.884
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.882
gene34006-v1.0-hybrid Fragaria vesca gene34006-v1.0-hybrid N 0.882
Bostr.4825s0021 Boechera stricta Bostr.4825s0021 I 0.882
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.882
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.881
Sb08g022560 Sorghum bicolor Sb08g022560 I 0.881
mgf022344m Mimulus guttatus mgf022344m I 0.881
Gorai.004G125900 Gossypium raimondii Gorai.004G125900 I 0.880
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.879
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.877
Si022714m.g Setaria italica Si022714m.g I 0.875
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.873
Sb02g026510 Sorghum bicolor Sb02g026510 I 0.873
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.872
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N 0.872
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.872
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.872
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.871
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.871
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.871
Si032702m.g Setaria italica Si032702m.g I 0.871
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.871
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.871
Pm028722 Prunus mume Pm028722 I 0.871
MDP0000214515 Malus domestica MDP0000214515 I 0.871
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I 0.871
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.871