Bo9g174170 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo9g174170 T292502_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC002
M00970_2.00
Arabidopsis thaliana
NBACGYAWMN

NKWTRCGTVN
PBM
Lindemose et al.(2014)
ATAF1
0.946 0.807
NAC002
M07159_2.00
Arabidopsis thaliana
KVCGTRWNNNWHWHKNHHWYND

HNRWDDNMDWDWNNNWYACGBM
Dap-seq
OMalley et al.(2016)
ATAF1_col_a
0.946 0.807
NAC002
M07160_2.00
Arabidopsis thaliana
YACGY

RCGTR
Dap-seq
OMalley et al.(2016)
ATAF1_colamp_a
0.946 0.807
NAC48
M11084_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC6_01
0.943 0.798
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY

RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.871 0.649
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g174170.1 NAC/NAM 8 131

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

399 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CaO19.10696 Candida albicans CaO19.10696 N 0.000
CD36_51720 Candida dubliniensis CD36_51720 N 0.000
CORT_0E05640 Candida orthopsilosis CORT_0E05640 N 0.000
CPAG_03332 Candida parapsilosis CPAG_03332 N 0.000
CTRG_05308 Candida tropicalis CTRG_05308 N 0.000
G210_3375 Candida maltosa G210_3375 N 0.000