Bra006392 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra006392 T292545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW

WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.963 0.839
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.957 0.946
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.957 0.946
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH

DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.956 0.839
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD

HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.956 0.839
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.944 0.821
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.944 0.821
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA

TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.940 0.830
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY

RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.928 0.741
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra006392.1-P NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIBMGA011510 Bombyx mori BGIBMGA011510 N 0.000
CGI_10009013 Crassostrea gigas CGI_10009013 N 0.000
EmuJ_000949000 Echinococcus multilocularis EmuJ_000949000 N 0.000
estExt_fgenesh2_pg.C_4800031 Branchiostoma floridae estExt_fgenesh2_pg.C_4800031 N 0.000
HMEL006500 Heliconius melpomene HMEL006500 N 0.000
HmN_000834300 Hymenolepis microstoma HmN_000834300 N 0.000
MCINX002154 Melitaea cinxia MCINX002154 N 0.000
PHUM239100 Pediculus humanus PHUM239100 N 0.000
Sakowv30041832m.g Saccoglossus kowalevskii Sakowv30041832m.g N 0.000
TASK_0000823901 Taenia asiatica TASK_0000823901 N 0.000
TsM_000037600 Taenia solium TsM_000037600 N 0.000