Bra007640 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra007640 T292550_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC066
M00978_2.00
Arabidopsis thaliana
NBNNHNBNNN

NNNVNDNNVN
PBM
Lindemose et al.(2014)
NST2
0.959 0.956
NAC043
M02370_2.00
Arabidopsis thaliana
NTTACGYWAN

NTWRCGTAAN
PBM
Weirauch et al.(2014)
pTH8161
0.958 0.939
NAC043
M07192_2.00
Arabidopsis thaliana
TRCKTVHDNHNYAMG

CKTRNDNHDBAMGYA
Dap-seq
OMalley et al.(2016)
NST1_colamp_a
0.958 0.939
NAC043
M07193_2.00
Arabidopsis thaliana
RCKTVHDNHNYAMGYWA

TWRCKTRNDNHDBAMGY
Dap-seq
OMalley et al.(2016)
NST1_col_v31
0.958 0.939
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.923 0.860
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN

NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.908 0.886
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN

NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.902 0.877
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra007640.1-P NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

Invalid Input OrderBy

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action