Bra022236 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra022236 T292609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH

DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.975 0.982
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD

HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.975 0.982
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA

TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.956 0.848
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW

WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.946 0.777
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.940 0.804
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG

CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.940 0.804
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH

DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.937 0.768
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA

TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.937 0.768
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY

RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.937 0.741
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra022236.1-P NAC/NAM 7 133

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30172.m000206 Ricinus communis 30172.m000206 I 0.975
Bostr.19424s0897 Boechera stricta Bostr.19424s0897 I 0.975
Carubv10014426m.g Capsella rubella Carubv10014426m.g I 0.975
Bo5g122710 Brassica oleracea Bo5g122710 I 0.975
Thhalv10021408m.g Eutrema salsugineum Thhalv10021408m.g I 0.975
anac057 Arabidopsis thaliana AT3G17730 D 0.975
anac057 Arabidopsis lyrata Al_scaffold_0003_1866 I 0.975
Cla018917 Citrullus lanatus Cla018917 I 0.974
Cucsa.112500 Cucumis sativus Cucsa.112500 I 0.974
Solyc03g098190.2 Solanum lycopersicum Solyc03g098190.2 I 0.974
gene09293-v1.0-hybrid Fragaria vesca gene09293-v1.0-hybrid I 0.974
Gorai.006G189600 Gossypium raimondii Gorai.006G189600 I 0.974
cassava4611.m1 Manihot esculenta cassava4611.m1 I 0.974
mgf009479m Mimulus guttatus mgf009479m I 0.974
PGSC0003DMG400031054 Solanum tuberosum PGSC0003DMG400031054 I 0.974
GLYMA09G29760 Glycine max GLYMA09G29760 I 0.972
Ca_18034 Cicer arietinum Ca_18034 I 0.972
GLYMA16G34310 Glycine max GLYMA16G34310 I 0.972
Lus10042284.g Linum usitatissimum Lus10042284.g I 0.971
Lus10026373.g Linum usitatissimum Lus10026373.g I 0.971
GSMUA_Achr3G13880_001 Musa acuminata GSMUA_Achr3G13880_001 I 0.970
ORGLA09G0151700 Oryza glaberrima ORGLA09G0151700 I 0.969
OS09G0552800 Oryza sativa OS09G0552800 I 0.969
LPERR09G14740 Leersia perrieri LPERR09G14740 I 0.969
ONIVA09G20110 Oryza nivara ONIVA09G20110 I 0.969
OGLUM09G19470 Oryza glumaepatula OGLUM09G19470 I 0.969
BGIOSGA031229 Oryza indica BGIOSGA031229 I 0.969
Aquca_002_01357 Aquilegia coerulea Aquca_002_01357 I 0.969
OMERI09G14160 Oryza meridionalis OMERI09G14160 I 0.969
OB09G25570 Oryza brachyantha OB09G25570 I 0.968
MTR_6g477900 Medicago truncatula MTR_6g477900 I 0.967
MDP0000387787 Malus domestica MDP0000387787 I 0.966
anac057 Populus trichocarpa POPTR_0012s03510 I 0.966
Sb02g032220 Sorghum bicolor Sb02g032220 I 0.966
AC233865.1_FG003 Zea mays AC233865.1_FG003 I 0.966
PK03341.1 Cannabis sativa PK03341.1 I 0.966
Ciclev10024520m.g Citrus clementina Ciclev10024520m.g I 0.966
anac057 Vitis vinifera VIT_17s0053g00740 I 0.966
Eucgr.H00614 Eucalyptus grandis Eucgr.H00614 I 0.966
TCM_044911 Theobroma cacao TCM_044911 I 0.966
orange1.1g040617m.g Citrus sinensis orange1.1g040617m.g I 0.966
MDP0000656113 Malus domestica MDP0000656113 I 0.966
POPTR_0015s05450 Populus trichocarpa POPTR_0015s05450 I 0.965
Si033085m.g Setaria italica Si033085m.g I 0.965
Pavir.Bb02627 Panicum virgatum Pavir.Bb02627 I 0.965
GSMUA_Achr8G13430_001 Musa acuminata GSMUA_Achr8G13430_001 I 0.965
Pavir.Ba01384 Panicum virgatum Pavir.Ba01384 I 0.965
GSMUA_Achr1G02820_001 Musa acuminata GSMUA_Achr1G02820_001 I 0.963
Cagra.1378s0012 Capsella grandiflora Cagra.1378s0012 I 0.963
GSMUA_Achr9G23940_001 Musa acuminata GSMUA_Achr9G23940_001 I 0.962
Gorai.001G070700 Gossypium raimondii Gorai.001G070700 I 0.962
SapurV1A.0202s0410 Salix purpurea SapurV1A.0202s0410 I 0.961
Aquca_002_01358 Aquilegia coerulea Aquca_002_01358 I 0.958
OBART03G01580 Oryza barthii OBART03G01580 I 0.957
OGLUM03G01540 Oryza glumaepatula OGLUM03G01540 I 0.957
OMERI03G01540 Oryza meridionalis OMERI03G01540 I 0.957
Traes_5AL_59A8F0CBD Triticum aestivum Traes_5AL_59A8F0CBD I 0.957
ORUFI03G01320 Oryza rufipogon ORUFI03G01320 I 0.957
OS03G0119966 Oryza sativa OS03G0119966 I 0.957
ORGLA03G0013500 Oryza glaberrima ORGLA03G0013500 I 0.957
OPUNC03G01460 Oryza punctata OPUNC03G01460 I 0.957
ONIVA09G11670 Oryza nivara ONIVA09G11670 I 0.957
Traes_5BL_581C3F5DA Triticum aestivum Traes_5BL_581C3F5DA I 0.957
TRIUR3_13806 Triticum urartu TRIUR3_13806 I 0.957
OLONG_013792 Oryza longistaminata OLONG_013792 I 0.957
BGIOSGA011734 Oryza indica BGIOSGA011734 I 0.957
MLOC_37844 Hordeum vulgare MLOC_37844 I 0.957
GLYMA11G33210 Glycine max GLYMA11G33210 I 0.957
OB03G11530 Oryza brachyantha OB03G11530 I 0.957
F775_13960 Aegilops tauschii F775_13960 I 0.957
BRADI1G77217 Brachypodium distachyon BRADI1G77217 I 0.957
LPERR03G01480 Leersia perrieri LPERR03G01480 I 0.957
Bra006392 Brassica rapa Bra006392 I 0.956
SapurV1A.0074s0150 Salix purpurea SapurV1A.0074s0150 I 0.956
Bo3g012450 Brassica oleracea Bo3g012450 I 0.956
PK26618.1 Cannabis sativa PK26618.1 D 0.956
SapurV1A.2754s0020 Salix purpurea SapurV1A.2754s0020 I 0.956
GLYMA02G40750 Glycine max GLYMA02G40750 I 0.955
Eucgr.F02910 Eucalyptus grandis Eucgr.F02910 I 0.955
Cucsa.173670 Cucumis sativus Cucsa.173670 I 0.955
VIT_04s0079g00280 Vitis vinifera VIT_04s0079g00280 I 0.955
Cla009281 Citrullus lanatus Cla009281 I 0.955
TCM_017681 Theobroma cacao TCM_017681 I 0.955
GLYMA14G39080 Glycine max GLYMA14G39080 I 0.955
evm.TU.supercontig_178.32 Carica papaya evm.TU.supercontig_178.32 I 0.954
POPTR_0017s02020 Populus trichocarpa POPTR_0017s02020 I 0.954
SapurV1A.0549s0150 Salix purpurea SapurV1A.0549s0150 I 0.954
30171.m000407 Ricinus communis 30171.m000407 I 0.954
Lus10007377.g Linum usitatissimum Lus10007377.g I 0.954
Pavir.Ib00051 Panicum virgatum Pavir.Ib00051 I 0.954
Pavir.Ia04558 Panicum virgatum Pavir.Ia04558 I 0.954
cassava38739.m1 Manihot esculenta cassava38739.m1 I 0.954
mgf025206m Mimulus guttatus mgf025206m I 0.954
anac086 Arabidopsis lyrata fgenesh2_kg.6__1724__AT5G17260.1 I 0.953
MDP0000199840 Malus domestica MDP0000199840 I 0.953
MDP0000204582 Malus domestica MDP0000204582 I 0.953
AMTR_s00044p00058960 Amborella trichopoda AMTR_s00044p00058960 I 0.952
POPTR_0004s07910 Populus trichocarpa POPTR_0004s07910 I 0.952
GLYMA18G05020 Glycine max GLYMA18G05020 I 0.951
PGSC0003DMG400021474 Solanum tuberosum PGSC0003DMG400021474 I 0.951
Bo9g161440 Brassica oleracea Bo9g161440 I 0.951
Thhalv10013344m.g Eutrema salsugineum Thhalv10013344m.g I 0.951
PDK_20s1433691g002 Phoenix dactylifera PDK_20s1433691g002 I 0.951
Solyc02g036430.1 Solanum lycopersicum Solyc02g036430.1 I 0.951
AMTR_s00037p00144010 Amborella trichopoda AMTR_s00037p00144010 I 0.951
Ca_23537 Cicer arietinum Ca_23537 I 0.951
SapurV1A.0147s0010 Salix purpurea SapurV1A.0147s0010 I 0.950
Pm010926 Prunus mume Pm010926 I 0.950
MTR_5g076850 Medicago truncatula MTR_5g076850 I 0.950
SapurV1A.1584s0060 Salix purpurea SapurV1A.1584s0060 I 0.950
Gorai.004G048200 Gossypium raimondii Gorai.004G048200 I 0.948
Ciclev10011293m.g Citrus clementina Ciclev10011293m.g I 0.947
Bostr.2618s0061 Boechera stricta Bostr.2618s0061 I 0.947
orange1.1g007938m.g Citrus sinensis orange1.1g007938m.g I 0.947
cassava20891.m1 Manihot esculenta cassava20891.m1 I 0.946
PK19314.1 Cannabis sativa PK19314.1 D 0.946
Ca_13258 Cicer arietinum Ca_13258 I 0.946
MTR_3g064580 Medicago truncatula MTR_3g064580 I 0.946
Lus10020794.g Linum usitatissimum Lus10020794.g I 0.946
MDP0000276982 Malus domestica MDP0000276982 I 0.946
Solyc02g081270.2 Solanum lycopersicum Solyc02g081270.2 I 0.946
Carubv10003869m.g Capsella rubella Carubv10003869m.g I 0.945
GRMZM2G174070 Zea mays GRMZM2G174070 I 0.945
Si034541m.g Setaria italica Si034541m.g I 0.945
Cagra.4849s0008 Capsella grandiflora Cagra.4849s0008 I 0.945
POPTR_0010s18180 Populus trichocarpa POPTR_0010s18180 I 0.945
Sb01g049240 Sorghum bicolor Sb01g049240 I 0.945
ANAC020 Vitis vinifera VIT_19s0085g00950 I 0.945
Gorai.007G188800 Gossypium raimondii Gorai.007G188800 I 0.945
Ca_14390 Cicer arietinum Ca_14390 I 0.945
GRMZM2G406204 Zea mays GRMZM2G406204 I 0.945
MDP0000520807 Malus domestica MDP0000520807 I 0.944
gene31658-v1.0-hybrid Fragaria vesca gene31658-v1.0-hybrid I 0.943
PRUPE_ppa002384mg Prunus persica PRUPE_ppa002384mg I 0.943
cassava30278.valid.m1 Manihot esculenta cassava30278.valid.m1 I 0.943
MTR_2g064090 Medicago truncatula MTR_2g064090 I 0.943
Pm012993 Prunus mume Pm012993 I 0.943
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.942
Gorai.013G146300 Gossypium raimondii Gorai.013G146300 I 0.941
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.941
SapurV1A.0149s0500 Salix purpurea SapurV1A.0149s0500 I 0.941
Cagra.2098s0066 Capsella grandiflora Cagra.2098s0066 I 0.940
Thhalv10022055m.g Eutrema salsugineum Thhalv10022055m.g I 0.940
Carubv10013584m.g Capsella rubella Carubv10013584m.g I 0.940
Traes_4BL_D592DBAAF Triticum aestivum Traes_4BL_D592DBAAF I 0.940
NAC045 Arabidopsis thaliana AT3G03200 D 0.940
Bo5g150170 Brassica oleracea Bo5g150170 I 0.940
Traes_4DL_A13AE4BE6 Triticum aestivum Traes_4DL_A13AE4BE6 I 0.940
Bo1g154830 Brassica oleracea Bo1g154830 I 0.940
MLOC_71128 Hordeum vulgare MLOC_71128 I 0.940
Bra032009 Brassica rapa Bra032009 I 0.940
Bra021366 Brassica rapa Bra021366 I 0.940
F775_22879 Aegilops tauschii F775_22879 I 0.940
anac045 Arabidopsis lyrata Al_scaffold_0003_260 I 0.940
Bostr.19046s0031 Boechera stricta Bostr.19046s0031 I 0.940
gene19716-v1.0-hybrid Fragaria vesca gene19716-v1.0-hybrid I 0.939
NAC086 Arabidopsis thaliana AT5G17260 I 0.939
TCM_033629 Theobroma cacao TCM_033629 I 0.939
29770.m000336 Ricinus communis 29770.m000336 I 0.939
Bra039745 Brassica rapa Bra039745 I 0.938
Bo2g052630 Brassica oleracea Bo2g052630 I 0.938
Cagra.11446s0003 Capsella grandiflora Cagra.11446s0003 I 0.938
Carubv10021788m.g Capsella rubella Carubv10021788m.g I 0.938
Bostr.26959s0323 Boechera stricta Bostr.26959s0323 I 0.938
Thhalv10018275m.g Eutrema salsugineum Thhalv10018275m.g I 0.938
Lus10010959.g Linum usitatissimum Lus10010959.g I 0.937
anac028 Arabidopsis lyrata Al_scaffold_0002_1137 I 0.937
ANAC020 Arabidopsis thaliana AT1G54330 D 0.937
GLYMA15G41825 Glycine max GLYMA15G41825 I 0.937
anac028 Arabidopsis thaliana AT1G65910 D 0.937
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.936
ANAC020 Populus trichocarpa POPTR_0008s08100 I 0.936
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.935
orange1.1g036998m.g Citrus sinensis orange1.1g036998m.g I 0.935
GSMUA_Achr11G01400_001 Musa acuminata GSMUA_Achr11G01400_001 I 0.935
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.935
OB09G25590 Oryza brachyantha OB09G25590 I 0.935
Ciclev10005341m.g Citrus clementina Ciclev10005341m.g I 0.935
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.935
Si032702m.g Setaria italica Si032702m.g I 0.935
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.935
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.935
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.934
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.933
GLYMA08G17351 Glycine max GLYMA08G17351 I 0.933
GSMUA_AchrUn_randomG08190_001 Musa acuminata GSMUA_AchrUn_randomG08190_001 I 0.933
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.933
Bostr.6758s0078 Boechera stricta Bostr.6758s0078 I 0.932
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.932
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.932
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.932
Bra003335 Brassica rapa Bra003335 I 0.932
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.932
Bo6g036040 Brassica oleracea Bo6g036040 I 0.931
Cucsa.118620 Cucumis sativus Cucsa.118620 I 0.929
Cla013653 Citrullus lanatus Cla013653 I 0.929
Cagra.1310s0016 Capsella grandiflora Cagra.1310s0016 I 0.928
Bra008567 Brassica rapa Bra008567 I 0.928
Carubv10012163m.g Capsella rubella Carubv10012163m.g I 0.928
Gorai.004G268400 Gossypium raimondii Gorai.004G268400 I 0.926
Bra030807 Brassica rapa Bra030807 I 0.924
Bo3g185870 Brassica oleracea Bo3g185870 I 0.924
ANAC020 Arabidopsis lyrata fgenesh2_kg.1__4648__AT1G54330.1 I 0.924
evm.TU.supercontig_38.43 Carica papaya evm.TU.supercontig_38.43 I 0.920
Thhalv10023058m.g Eutrema salsugineum Thhalv10023058m.g I 0.919
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.915
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.910
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.907
AMTR_s00149p00068500 Amborella trichopoda AMTR_s00149p00068500 I 0.896
F775_13961 Aegilops tauschii F775_13961 I 0.895
mgf019012m Mimulus guttatus mgf019012m I 0.879
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.879
Thhalv10027064m.g Eutrema salsugineum Thhalv10027064m.g I 0.878
Aquca_044_00122 Aquilegia coerulea Aquca_044_00122 I 0.878
AMTR_s00071p00055960 Amborella trichopoda AMTR_s00071p00055960 I 0.872
chr2.CM0021.650.nc Lotus japonicus chr2.CM0021.650.nc I 0.872