Bra023288 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra023288 T292612_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN

NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.965 0.956
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN

NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.952 0.895
NAC043
M02370_2.00
Arabidopsis thaliana
NTTACGYWAN

NTWRCGTAAN
PBM
Weirauch et al.(2014)
pTH8161
0.925 0.868
NAC043
M07192_2.00
Arabidopsis thaliana
TRCKTVHDNHNYAMG

CKTRNDNHDBAMGYA
Dap-seq
OMalley et al.(2016)
NST1_colamp_a
0.925 0.868
NAC043
M07193_2.00
Arabidopsis thaliana
RCKTVHDNHNYAMGYWA

TWRCKTRNDNHDBAMGY
Dap-seq
OMalley et al.(2016)
NST1_col_v31
0.925 0.868
SMB
M07184_2.00
Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH

DRTWRCKTRNDNHDBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_col_a
0.912 0.798
SMB
M07185_2.00
Arabidopsis thaliana
TWNCKTVNNNNNYAMG

CKTRNNNNNBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_colamp_a
0.912 0.798
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND

HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.912 0.868
BRN2
M07217_2.00
Arabidopsis thaliana
CKTVHDNNNYAMGYWA

TWRCKTRNNNHDBAMG
Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a
0.897 0.781
BRN2
M07218_2.00
Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH

DDTWRCKTRHDNHDBAMGHWA
Dap-seq
OMalley et al.(2016)
ANAC070_col
0.897 0.781
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra023288.1-P NAC/NAM 17 144

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

283 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009617 Calypte anna Aan_R009617 I 0.000
Aan_R009930 Calypte anna Aan_R009930 I 0.000
Afo_R005569 Aptenodytes forsteri Afo_R005569 I 0.000
Afo_R014105 Aptenodytes forsteri Afo_R014105 I 0.000
Alligator_sinensis_CCG019449.2 Alligator sinensis Alligator_sinensis_CCG019449.2 I 0.000
Alligator_sinensis_CCG019450.1 Alligator sinensis Alligator_sinensis_CCG019450.1 I 0.000
Alligator_sinensis_CCG019475.1 Alligator sinensis Alligator_sinensis_CCG019475.1 I 0.000
Alligator_sinensis_CCG021936.1 Alligator sinensis Alligator_sinensis_CCG021936.1 I 0.000
ARB_00838 Arthroderma benhamiae ARB_00838 I 0.000
Brh_R007241 Buceros rhinoceros Brh_R007241 I 0.000
Cmyd_10004276 Chelonia mydas Cmyd_10004276 I 0.000
ENSAMEG00000007373 Ailuropoda melanoleuca ENSAMEG00000007373 I 0.000
ENSAMXG00000017965 Astyanax mexicanus ENSAMXG00000017965 I 0.000
ENSAPLG00000005126 Anas platyrhynchos ENSAPLG00000005126 I 0.000
ENSAPLG00000014710 Anas platyrhynchos ENSAPLG00000014710 I 0.000
ENSCHOG00000010951 Choloepus hoffmanni ENSCHOG00000010951 I 0.000
ENSCSAG00000005351 Chlorocebus sabaeus ENSCSAG00000005351 I 0.000
ENSCSAG00000016240 Chlorocebus sabaeus ENSCSAG00000016240 I 0.000
ENSDNOG00000048985 Dasypus novemcinctus ENSDNOG00000048985 I 0.000
ENSFALG00000004260 Ficedula albicollis ENSFALG00000004260 I 0.000
ENSFALG00000011294 Ficedula albicollis ENSFALG00000011294 I 0.000
ENSFCAG00000025714 Felis catus ENSFCAG00000025714 I 0.000
ENSFCAG00000027283 Felis catus ENSFCAG00000027283 I 0.000
ENSGALG00000004644 Gallus gallus ENSGALG00000004644 I 0.000
ENSGALG00000014870 Gallus gallus ENSGALG00000014870 I 0.000
ENSGGOG00000024705 Gorilla gorilla ENSGGOG00000024705 I 0.000
ENSGMOG00000014148 Gadus morhua ENSGMOG00000014148 I 0.000
ENSLACG00000002436 Latimeria chalumnae ENSLACG00000002436 I 0.000
ENSLOCG00000017255 Lepisosteus oculatus ENSLOCG00000017255 I 0.000
ENSMGAG00000000814 Meleagris gallopavo ENSMGAG00000000814 I 0.000
ENSMICG00000006415 Microcebus murinus ENSMICG00000006415 I 0.000
ENSMODG00000027338 Monodelphis domestica ENSMODG00000027338 I 0.000
ENSMPUG00000014453 Mustela putorius furo ENSMPUG00000014453 I 0.000
ENSNLEG00000013721 Nomascus leucogenys ENSNLEG00000013721 I 0.000
ENSOANG00000008146 Ornithorhynchus anatinus ENSOANG00000008146 I 0.000
ENSOARG00000008274 Ovis aries ENSOARG00000008274 I 0.000
ENSONIG00000001677 Oreochromis niloticus ENSONIG00000001677 I 0.000
ENSP00000357440-D1 Bos grunniens ENSP00000357440-D1 I 0.000
ENSPANG00000022516 Papio anubis ENSPANG00000022516 I 0.000
ENSPPYG00000016976 Pongo abelii ENSPPYG00000016976 I 0.000
ENSPSIG00000014566 Pelodiscus sinensis ENSPSIG00000014566 I 0.000
ENSSHAG00000005636 Sarcophilus harrisii ENSSHAG00000005636 I 0.000
ENSSHAG00000013467 Sarcophilus harrisii ENSSHAG00000013467 I 0.000
ENSSTOG00000007461 Ictidomys tridecemlineatus ENSSTOG00000007461 I 0.000
ENSTBEG00000007814 Tupaia belangeri ENSTBEG00000007814 I 0.000
ENSTBEG00000012453 Tupaia belangeri ENSTBEG00000012453 I 0.000
ENSTBEG00000013569 Tupaia belangeri ENSTBEG00000013569 I 0.000
ENSTGUG00000002805 Taeniopygia guttata ENSTGUG00000002805 I 0.000
ENSTSYG00000005378 Tarsius syrichta ENSTSYG00000005378 I 0.000
e_gw1.8.1452.1 Mycosphaerella graminicola e_gw1.8.1452.1 I 0.000
Gfo_R015522 Geospiza fortis Gfo_R015522 I 0.000
Gfo_R016174 Geospiza fortis Gfo_R016174 I 0.000
H101_05876 Trichophyton interdigitale H101_05876 I 0.000
H102_04635 Trichophyton rubrum H102_04635 I 0.000
H105_04657 Trichophyton soudanense H105_04657 I 0.000
HSF2 Vicugna pacos ENSVPAG00000009387 I 0.000
HSF2 Sus scrofa ENSSSCG00000004238 I 0.000
HSF2 Tursiops truncatus ENSTTRG00000000247 I 0.000
HSF2 Taeniopygia guttata ENSTGUG00000011838 I 0.000
HSF2 Anolis carolinensis ENSACAG00000001260 I 0.000
HSF2 Gorilla gorilla ENSGGOG00000023192 I 0.000
hsf2 Danio rerio ENSDARG00000053097 D 0.000
hsf2 Gasterosteus aculeatus ENSGACG00000004065 I 0.000
HSF2 Homo sapiens ENSG00000025156 D 0.000
HSF2 Echinops telfairi ENSETEG00000006154 I 0.000
HSF2 Erinaceus europaeus ENSEEUG00000000435 I 0.000
Hsf2 Dipodomys ordii ENSDORG00000012571 I 0.000
HSF2 Dasypus novemcinctus ENSDNOG00000031260 I 0.000
HSF2 Cavia porcellus ENSCPOG00000007509 I 0.000
HSF2 Callithrix jacchus ENSCJAG00000003956 I 0.000
HSF2 Canis familiaris ENSCAFG00000000969 I 0.000
HSF2 Bos taurus ENSBTAG00000012946 I 0.000
HSF2 Equus caballus ENSECAG00000012553 I 0.000
HSF2 Oryctolagus cuniculus ENSOCUG00000025991 I 0.000
HSF2 Otolemur garnettii ENSOGAG00000015721 I 0.000
Hsf2 Mus musculus ENSMUSG00000019878 D 0.000
HSF2 Monodelphis domestica ENSMODG00000017753 I 0.000
HSF2 Macaca mulatta ENSMMUG00000007910 I 0.000
HSF2 Myotis lucifugus ENSMLUG00000002355 I 0.000
HSF2 Meleagris gallopavo ENSMGAG00000013320 I 0.000
hsf2 Oryzias latipes ENSORLG00000015498 I 0.000
HSF2 Procavia capensis ENSPCAG00000016109 I 0.000
HSF2 Pan troglodytes ENSPTRG00000018561 I 0.000
HSF2 Loxodonta africana ENSLAFG00000006440 I 0.000
Hsf2 Rattus norvegicus ENSRNOG00000000808 I 0.000
HSF2 Ornithorhynchus anatinus ENSOANG00000014662 I 0.000
hsf2.L Xenopus laevis XB-GENE-954983 I 0.000
hsf3 Xenopus tropicalis XB-GENE-1021762 I 0.000
MPH_06790 Macrophomina phaseolina MPH_06790 I 0.000
Mycgr3G45761 Zymoseptoria tritici Mycgr3G45761 I 0.000
Myotis_brandtii_HSF2_10035618 Myotis brandtii Myotis_brandtii_HSF2_10035618 I 0.000
Ogr00694 Ophisaurus gracilis Ogr00694 I 0.000
OIDMADRAFT_43104 Oidiodendron maius OIDMADRAFT_43104 I 0.000
PV09_00139 Verruconis gallopava PV09_00139 I 0.000
Pvit_08961 Pogona vitticeps Pvit_08961 I 0.000
Tal_R003171 Tyto alba Tal_R003171 I 0.000
Tal_R013611 Tyto alba Tal_R013611 I 0.000
TEQG_06155 Trichophyton equinum TEQG_06155 I 0.000
TESG_06833 Trichophyton tonsurans TESG_06833 I 0.000
TRV_07496 Trichophyton verrucosum TRV_07496 I 0.000
UCRNP2_367 Neofusicoccum parvum UCRNP2_367 I 0.000
UCRNP2_7828 Neofusicoccum parvum UCRNP2_7828 I 0.000
W97_05233 Coniosporium apollinis W97_05233 I 0.000
XP_002937261 Xenopus tropicalis XP_002937261 I 0.000
XP_002937262 Xenopus tropicalis XP_002937262 I 0.000