Bra024733 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra024733 T292622_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
anac075
M07223_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
ANAC075_col_a 		0.929 0.591
PK27085.1
M01293_2.00 		Cannabis sativa
AATTTATT
AATAAATT		 PBM
Lambert et al.(2019)
pTH11262 		0.928 0.591
NAC073
M07221_2.00 		Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG		 Dap-seq
OMalley et al.(2016)
SND2_col_a 		0.927 0.618
NAC073
M07222_2.00 		Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND2_colamp_a 		0.927 0.618
NAC010
M07167_2.00 		Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN		 Dap-seq
OMalley et al.(2016)
SND3_colamp_a 		0.922 0.573
NAC010
M07168_2.00 		Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG		 Dap-seq
OMalley et al.(2016)
SND3_col_b 		0.922 0.573
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra024733.1-P NAC/NAM 59 192

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

273 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g043100 Brassica oleracea Bo5g043100 I 0.995
Carubv10009087m.g Capsella rubella Carubv10009087m.g I 0.992
SOG1 Arabidopsis lyrata scaffold_102939.1 I 0.992
Thhalv10007551m.g Eutrema salsugineum Thhalv10007551m.g I 0.992
Cagra.11546s0003 Capsella grandiflora Cagra.11546s0003 I 0.992
SOG1 Arabidopsis thaliana AT1G25580 I 0.991
Bo7g052860 Brassica oleracea Bo7g052860 I 0.988
Bra012470 Brassica rapa Bra012470 I 0.988
Bostr.12659s0396 Boechera stricta Bostr.12659s0396 I 0.987
PRUPE_ppa005648mg Prunus persica PRUPE_ppa005648mg I 0.977
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.976
Pm029010 Prunus mume Pm029010 I 0.976
POPTR_0008s11550 Populus trichocarpa POPTR_0008s11550 I 0.975
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.974
Solyc05g009840.2 Solanum lycopersicum Solyc05g009840.2 I 0.974
29738.m001046 Ricinus communis 29738.m001046 I 0.974
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.974
gene03875-v1.0-hybrid Fragaria vesca gene03875-v1.0-hybrid I 0.972
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.972
SOG1 Vitis vinifera VIT_01s0011g02990 I 0.971
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.971
TCM_011869 Theobroma cacao TCM_011869 I 0.970
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.970
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.969
Lus10021708.g Linum usitatissimum Lus10021708.g I 0.969
PK25812.1 Cannabis sativa PK25812.1 I 0.968
Gorai.008G186300 Gossypium raimondii Gorai.008G186300 I 0.968
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.968
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I 0.967
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.967
Cla020673 Citrullus lanatus Cla020673 I 0.967
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.967
Eucgr.G02349 Eucalyptus grandis Eucgr.G02349 I 0.966
mgf012882m Mimulus guttatus mgf012882m I 0.965
MTR_1g093680 Medicago truncatula MTR_1g093680 I 0.962
cassava46297.m1 Manihot esculenta cassava46297.m1 I 0.958
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.955
MDP0000216205 Malus domestica MDP0000216205 I 0.954
MDP0000165845 Malus domestica MDP0000165845 I 0.954
Ca_24772 Cicer arietinum Ca_24772 I 0.949
MTR_1g093670 Medicago truncatula MTR_1g093670 I 0.948
MTR_5g053430 Medicago truncatula MTR_5g053430 I 0.944
OB06G19430 Oryza brachyantha OB06G19430 I 0.939
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I 0.937
TRIUR3_21992 Triticum urartu TRIUR3_21992 I 0.937
Traes_7AS_6E6A5CD04 Triticum aestivum Traes_7AS_6E6A5CD04 I 0.937
OPUNC06G09830 Oryza punctata OPUNC06G09830 I 0.937
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I 0.937
orange1.1g014310m.g Citrus sinensis orange1.1g014310m.g I 0.936
OBART06G10240 Oryza barthii OBART06G10240 I 0.935
ONIVA06G11950 Oryza nivara ONIVA06G11950 I 0.935
OGLUM06G11140 Oryza glumaepatula OGLUM06G11140 I 0.935
ORUFI06G10770 Oryza rufipogon ORUFI06G10770 I 0.935
OMERI06G11940 Oryza meridionalis OMERI06G11940 I 0.935
ORGLA06G0096700 Oryza glaberrima ORGLA06G0096700 I 0.935
OLONG_017685 Oryza longistaminata OLONG_017685 I 0.935
BGIOSGA022664 Oryza indica BGIOSGA022664 I 0.934
Eucgr.E03226 Eucalyptus grandis Eucgr.E03226 I 0.933
Ciclev10031598m.g Citrus clementina Ciclev10031598m.g I 0.932
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.932
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I 0.932
GSMUA_AchrUn_randomG28610_001 Musa acuminata GSMUA_AchrUn_randomG28610_001 I 0.932
Si006639m.g Setaria italica Si006639m.g I 0.931
GLYMA10G34730 Glycine max GLYMA10G34730 I 0.931
Bra011090 Brassica rapa Bra011090 I 0.931
Bo1g016630 Brassica oleracea Bo1g016630 I 0.931
PGSC0003DMG400016896 Solanum tuberosum PGSC0003DMG400016896 I 0.931
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.931
Solyc05g026180.1 Solanum lycopersicum Solyc05g026180.1 I 0.931
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I 0.930
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I 0.930
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I 0.930
Sb10g009670 Sorghum bicolor Sb10g009670 I 0.930
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I 0.930
cassava11584.m1 Manihot esculenta cassava11584.m1 I 0.930
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I 0.930
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I 0.930
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I 0.930
GLYMA08G03590 Glycine max GLYMA08G03590 I 0.930
GLYMA01G00880 Glycine max GLYMA01G00880 I 0.930
29912.m005354 Ricinus communis 29912.m005354 I 0.930
TCM_037747 Theobroma cacao TCM_037747 I 0.930
cassava44586.m1 Manihot esculenta cassava44586.m1 I 0.930
GSMUA_Achr7G09510_001 Musa acuminata GSMUA_Achr7G09510_001 I 0.930
Cucsa.288680 Cucumis sativus Cucsa.288680 I 0.929
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I 0.929
GRMZM2G078954 Zea mays GRMZM2G078954 I 0.929
MDP0000124509 Malus domestica MDP0000124509 I 0.929
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I 0.929
Cla011431 Citrullus lanatus Cla011431 I 0.929
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I 0.929
POPTR_0004s04900 Populus trichocarpa POPTR_0004s04900 I 0.929
anac075 Arabidopsis thaliana AT4G29230 D 0.929
GLYMA05G36031 Glycine max GLYMA05G36031 I 0.929
Carubv10004602m.g Capsella rubella Carubv10004602m.g I 0.929
GSMUA_Achr6G05480_001 Musa acuminata GSMUA_Achr6G05480_001 I 0.929
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I 0.929
GRMZM2G379608 Zea mays GRMZM2G379608 I 0.929
GRMZM2G086768 Zea mays GRMZM2G086768 I 0.929
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I 0.929
GRMZM2G027309 Zea mays GRMZM2G027309 I 0.929
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I 0.928
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.928
Pm027280 Prunus mume Pm027280 I 0.928
PK27085.1 Cannabis sativa PK27085.1 D 0.928
Bra011034 Brassica rapa Bra011034 I 0.927
Bo1g017410 Brassica oleracea Bo1g017410 I 0.927
ANAC073 Arabidopsis lyrata Al_scaffold_0007_1273 I 0.927
NAC073 Arabidopsis thaliana AT4G28500 D 0.927
Pavir.J13205 Panicum virgatum Pavir.J13205 I 0.927
Carubv10005324m.g Capsella rubella Carubv10005324m.g I 0.927
Pavir.Eb00261 Panicum virgatum Pavir.Eb00261 I 0.927
Cagra.1225s0041 Capsella grandiflora Cagra.1225s0041 I 0.927
GRMZM2G166721 Zea mays GRMZM2G166721 I 0.927
GRMZM2G112681 Zea mays GRMZM2G112681 I 0.927
Sb03g003170 Sorghum bicolor Sb03g003170 I 0.927
OBART01G05840 Oryza barthii OBART01G05840 I 0.926
ONIVA01G06690 Oryza nivara ONIVA01G06690 I 0.926
OB01G15780 Oryza brachyantha OB01G15780 I 0.926
LPERR01G05530 Leersia perrieri LPERR01G05530 I 0.926
OLONG_008708 Oryza longistaminata OLONG_008708 I 0.926
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I 0.926
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I 0.926
OPUNC01G05680 Oryza punctata OPUNC01G05680 I 0.926
OS01G0191300 Oryza sativa OS01G0191300 I 0.926
BGIOSGA002220 Oryza indica BGIOSGA002220 I 0.926
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I 0.926
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.925
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.925
Thhalv10025819m.g Eutrema salsugineum Thhalv10025819m.g I 0.925
Si001527m.g Setaria italica Si001527m.g I 0.925
Bra024197 Brassica rapa Bra024197 I 0.924
MTR_4g078875 Medicago truncatula MTR_4g078875 I 0.923
30190.m010767 Ricinus communis 30190.m010767 I 0.923
Gorai.010G078900 Gossypium raimondii Gorai.010G078900 I 0.923
Cucsa.126960 Cucumis sativus Cucsa.126960 I 0.923
ANAC010 Arabidopsis lyrata scaffold_103183.1 I 0.922
Thhalv10008249m.g Eutrema salsugineum Thhalv10008249m.g I 0.922
Carubv10009638m.g Capsella rubella Carubv10009638m.g I 0.922
Bra032910 Brassica rapa Bra032910 I 0.922
NAC010 Arabidopsis thaliana AT1G28470 D 0.922
Bo5g055990 Brassica oleracea Bo5g055990 I 0.922
Cagra.1822s0012 Capsella grandiflora Cagra.1822s0012 I 0.922
BRADI2G05700 Brachypodium distachyon BRADI2G05700 I 0.921
chr3.CM0160.860.nd Lotus japonicus chr3.CM0160.860.nd I 0.921
cassava1596.valid.m1 Manihot esculenta cassava1596.valid.m1 I 0.921
MLOC_75795 Hordeum vulgare MLOC_75795 I 0.921
Solyc02g077610.2 Solanum lycopersicum Solyc02g077610.2 I 0.920
Lus10013967.g Linum usitatissimum Lus10013967.g I 0.920
Bo7g113170 Brassica oleracea Bo7g113170 I 0.920
PGSC0003DMG400031753 Solanum tuberosum PGSC0003DMG400031753 I 0.920
Gorai.010G157600 Gossypium raimondii Gorai.010G157600 I 0.919
Lus10015392.g Linum usitatissimum Lus10015392.g I 0.918
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.918
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.917
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.917
Bra024152 Brassica rapa Bra024152 I 0.917
F775_07518 Aegilops tauschii F775_07518 I 0.917
Si024889m.g Setaria italica Si024889m.g I 0.917
Bo7g113660 Brassica oleracea Bo7g113660 I 0.917
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I 0.916
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.916
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I 0.916
ANAC010 Vitis vinifera VIT_10s0003g00350 I 0.915
GLYMA12G13710 Glycine max GLYMA12G13710 I 0.915
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.915
Si019444m.g Setaria italica Si019444m.g I 0.915
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I 0.914
Bo7g047040 Brassica oleracea Bo7g047040 I 0.914
GLYMA07G32250 Glycine max GLYMA07G32250 I 0.914
Ca_02457 Cicer arietinum Ca_02457 I 0.913
Ca_06348 Cicer arietinum Ca_06348 I 0.913
MDP0000309351 Malus domestica MDP0000309351 I 0.912
GLYMA12G33460 Glycine max GLYMA12G33460 I 0.912
GLYMA13G36980 Glycine max GLYMA13G36980 I 0.912
Pm010104 Prunus mume Pm010104 I 0.912
Ca_11273 Cicer arietinum Ca_11273 I 0.912
MDP0000276278 Malus domestica MDP0000276278 I 0.912
TCM_029798 Theobroma cacao TCM_029798 I 0.912
GLYMA06G44250 Glycine max GLYMA06G44250 I 0.912
GSMUA_Achr4G30940_001 Musa acuminata GSMUA_Achr4G30940_001 I 0.911
GLYMA13G24320 Glycine max GLYMA13G24320 I 0.910
MTR_2g090735 Medicago truncatula MTR_2g090735 I 0.910
evm.TU.supercontig_2586.1 Carica papaya evm.TU.supercontig_2586.1 I 0.909
Aquca_051_00040 Aquilegia coerulea Aquca_051_00040 I 0.909
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.907
Bra030099 Brassica rapa Bra030099 I 0.906
GLYMA07G15180 Glycine max GLYMA07G15180 I 0.905
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.904
GSMUA_Achr4G02730_001 Musa acuminata GSMUA_Achr4G02730_001 I 0.904
GRMZM2G450445 Zea mays GRMZM2G450445 N 0.903
OBART05G06140 Oryza barthii OBART05G06140 I 0.902
BGIOSGA018654 Oryza indica BGIOSGA018654 I 0.902
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.902
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I 0.902
ORGLA05G0055000 Oryza glaberrima ORGLA05G0055000 I 0.902
OS05G0194500 Oryza sativa OS05G0194500 I 0.902
Pavir.J36494 Panicum virgatum Pavir.J36494 I 0.902
ONIVA05G06750 Oryza nivara ONIVA05G06750 I 0.902
OLONG_021085 Oryza longistaminata OLONG_021085 I 0.902
TRIUR3_31341 Triticum urartu TRIUR3_31341 I 0.901
F775_07141 Aegilops tauschii F775_07141 I 0.901
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.900
Sb09g006018 Sorghum bicolor Sb09g006018 I 0.900
OGLUM05G06420 Oryza glumaepatula OGLUM05G06420 I 0.899
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.898
29917.m002016 Ricinus communis 29917.m002016 I 0.898
TCM_016984 Theobroma cacao TCM_016984 I 0.898
Pm015625 Prunus mume Pm015625 I 0.898
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.897
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.897
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.897
Cla009808 Citrullus lanatus Cla009808 I 0.896
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.896
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.894
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.894
TCM_008229 Theobroma cacao TCM_008229 I 0.894
29983.m003125 Ricinus communis 29983.m003125 I 0.894
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.893
Pavir.Gb01338 Panicum virgatum Pavir.Gb01338 I 0.893
Pavir.J05241 Panicum virgatum Pavir.J05241 I 0.892
Si002301m.g Setaria italica Si002301m.g I 0.892
Sb03g030750 Sorghum bicolor Sb03g030750 I 0.892
TRIUR3_27393 Triticum urartu TRIUR3_27393 I 0.892
ORGLA01G0213300 Oryza glaberrima ORGLA01G0213300 I 0.891
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.890
OLONG_014922 Oryza longistaminata OLONG_014922 I 0.890
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.890
GSMUA_Achr6G27000_001 Musa acuminata GSMUA_Achr6G27000_001 I 0.890
Bostr.7867s0691 Boechera stricta Bostr.7867s0691 I 0.890
PK28347.1 Cannabis sativa PK28347.1 I 0.889
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.888
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.888
Sb09g006015 Sorghum bicolor Sb09g006015 I 0.888
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.887
AMTR_s00060p00054700 Amborella trichopoda AMTR_s00060p00054700 I 0.885
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I 0.884
POPTR_0007s01350 Populus trichocarpa POPTR_0007s01350 I 0.884
ORUFI01G29010 Oryza rufipogon ORUFI01G29010 I 0.884
OPUNC01G25960 Oryza punctata OPUNC01G25960 I 0.884
GSMUA_Achr2G09080_001 Musa acuminata GSMUA_Achr2G09080_001 I 0.884
OMERI01G23720 Oryza meridionalis OMERI01G23720 I 0.884
POPTR_0011s05740 Populus trichocarpa POPTR_0011s05740 I 0.883
Pavir.Db01100 Panicum virgatum Pavir.Db01100 I 0.883
ONIVA01G29490 Oryza nivara ONIVA01G29490 I 0.881
OGLUM01G29870 Oryza glumaepatula OGLUM01G29870 I 0.881
cassava17166.m1 Manihot esculenta cassava17166.m1 I 0.880
F775_16052 Aegilops tauschii F775_16052 I 0.880
Sb06g020103 Sorghum bicolor Sb06g020103 I 0.879
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.879
SapurV1A.0032s0620 Salix purpurea SapurV1A.0032s0620 I 0.879
LPERR01G22300 Leersia perrieri LPERR01G22300 I 0.879
Cla019994 Citrullus lanatus Cla019994 I 0.879
Sb09g028430 Sorghum bicolor Sb09g028430 I 0.878
Pavir.Eb02718 Panicum virgatum Pavir.Eb02718 I 0.877
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I 0.877
Eucgr.D00591 Eucalyptus grandis Eucgr.D00591 I 0.876
SapurV1A.0012s0710 Salix purpurea SapurV1A.0012s0710 I 0.876
GRMZM2G031200 Zea mays GRMZM2G031200 I 0.875
Cucsa.046530 Cucumis sativus Cucsa.046530 I 0.875
BGIOSGA001044 Oryza indica BGIOSGA001044 I 0.875
Pavir.Ca00926 Panicum virgatum Pavir.Ca00926 I 0.874
OB05G15600 Oryza brachyantha OB05G15600 I 0.874
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I 0.873
chr6.LjT04E21.30.nc Lotus japonicus chr6.LjT04E21.30.nc I 0.872
Pavir.J04559 Panicum virgatum Pavir.J04559 I 0.872
Bostr.1460s0050 Boechera stricta Bostr.1460s0050 N 0.872
Cagra.1561s0026 Capsella grandiflora Cagra.1561s0026 N 0.872
Si022710m.g Setaria italica Si022710m.g I 0.872
Si010735m.g Setaria italica Si010735m.g I 0.871
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I 0.871
anac044 Arabidopsis lyrata Al_scaffold_0003_51 N 0.871
PK17141.1 Cannabis sativa PK17141.1 I 0.871