Bra027596 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra027596 T292636_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG

CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.960 0.616
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra027596.1-P NAC/NAM 5 129

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.25375s0002 Boechera stricta Bostr.25375s0002 I 0.976
Bra036328 Brassica rapa Bra036328 I 0.969
Bo9g004070 Brassica oleracea Bo9g004070 I 0.968
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.965
NAC69 Arabidopsis thaliana AT4G01550 D 0.960
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.960
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.956
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.956
Bra008553 Brassica rapa Bra008553 I 0.953
Bo00853s060 Brassica oleracea Bo00853s060 I 0.950
fgenesh1_pg.C_scaffold_3000386 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000386 I 0.948
Thhalv10007665m.g Eutrema salsugineum Thhalv10007665m.g I 0.938
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.931
Bo6g119080 Brassica oleracea Bo6g119080 I 0.931
Bo9g004090 Brassica oleracea Bo9g004090 I 0.931
Ca_20988 Cicer arietinum Ca_20988 I 0.930
Bo5g002850 Brassica oleracea Bo5g002850 I 0.930
Bo5g002810 Brassica oleracea Bo5g002810 I 0.930
PGSC0003DMG400000555 Solanum tuberosum PGSC0003DMG400000555 I 0.928
Solyc03g080090.2 Solanum lycopersicum Solyc03g080090.2 I 0.928
Bo9g061230 Brassica oleracea Bo9g061230 I 0.928
Carubv10009049m.g Capsella rubella Carubv10009049m.g I 0.925
Cagra.1968s0045 Capsella grandiflora Cagra.1968s0045 I 0.925
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.925
GRMZM2G003715 Zea mays GRMZM2G003715 I 0.919
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.916
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.915
Aquca_009_00966 Aquilegia coerulea Aquca_009_00966 I 0.915
MDP0000282616 Malus domestica MDP0000282616 I 0.913
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.911
MTR_8g023840 Medicago truncatula MTR_8g023840 I 0.911
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.911
mgf015836m Mimulus guttatus mgf015836m I 0.910
Bra033296 Brassica rapa Bra033296 I 0.909
AMTR_s00018p00071850 Amborella trichopoda AMTR_s00018p00071850 I 0.908
Solyc06g074170.2 Solanum lycopersicum Solyc06g074170.2 I 0.908
evm.TU.contig_29561 Carica papaya evm.TU.contig_29561 I 0.905
Eucgr.K02303 Eucalyptus grandis Eucgr.K02303 I 0.905
BRADI4G37327 Brachypodium distachyon BRADI4G37327 I 0.905
LPERR09G14720 Leersia perrieri LPERR09G14720 I 0.904
OGLUM09G19480 Oryza glumaepatula OGLUM09G19480 I 0.903
BGIOSGA031230 Oryza indica BGIOSGA031230 I 0.903
ORGLA09G0151800 Oryza glaberrima ORGLA09G0151800 I 0.903
ONIVA09G20130 Oryza nivara ONIVA09G20130 I 0.903
OMERI09G14170 Oryza meridionalis OMERI09G14170 I 0.903
OB09G25590 Oryza brachyantha OB09G25590 I 0.903
Pm028711 Prunus mume Pm028711 I 0.903
Sb02g032230 Sorghum bicolor Sb02g032230 I 0.902
Traes_5BL_8BE382FE3 Triticum aestivum Traes_5BL_8BE382FE3 I 0.901
Traes_5DL_B69423A67 Triticum aestivum Traes_5DL_B69423A67 I 0.901
TRIUR3_13805 Triticum urartu TRIUR3_13805 I 0.901
gene08448-v1.0-hybrid Fragaria vesca gene08448-v1.0-hybrid I 0.901
MLOC_37843 Hordeum vulgare MLOC_37843 I 0.901
PGSC0003DMG400005892 Solanum tuberosum PGSC0003DMG400005892 I 0.900
Pavir.Ba01386 Panicum virgatum Pavir.Ba01386 I 0.899
Pavir.Bb02626 Panicum virgatum Pavir.Bb02626 I 0.899
Solyc11g068750.1 Solanum lycopersicum Solyc11g068750.1 I 0.899
PGSC0003DMG400019615 Solanum tuberosum PGSC0003DMG400019615 I 0.899
POPTR_0002s15560 Populus trichocarpa POPTR_0002s15560 I 0.898
Si032702m.g Setaria italica Si032702m.g I 0.898
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.895
Bo9g004110 Brassica oleracea Bo9g004110 I 0.895
Carubv10009451m.g Capsella rubella Carubv10009451m.g I 0.895
PRUPE_ppa022384mg Prunus persica PRUPE_ppa022384mg I 0.894
mgf022344m Mimulus guttatus mgf022344m I 0.893
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.892
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.891
MDP0000575835 Malus domestica MDP0000575835 I 0.890
PRUPE_ppb017658mg Prunus persica PRUPE_ppb017658mg I 0.890
MTR_8g023860 Medicago truncatula MTR_8g023860 I 0.890
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.890
GSMUA_Achr4G32010_001 Musa acuminata GSMUA_Achr4G32010_001 I 0.889
Bra036327 Brassica rapa Bra036327 I 0.888
POPTR_0002s18320 Populus trichocarpa POPTR_0002s18320 I 0.888
MTR_8g023880 Medicago truncatula MTR_8g023880 N 0.887
Bo9g004100 Brassica oleracea Bo9g004100 I 0.885
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.885
Gorai.006G203800 Gossypium raimondii Gorai.006G203800 I 0.884
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.884
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.884
F775_13961 Aegilops tauschii F775_13961 I 0.884
Bo5g002830 Brassica oleracea Bo5g002830 N 0.884
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.884
BGIOSGA027623 Oryza indica BGIOSGA027623 I 0.883
ORUFI08G03870 Oryza rufipogon ORUFI08G03870 I 0.883
OS08G0157900 Oryza sativa OS08G0157900 I 0.883
ONIVA08G03440 Oryza nivara ONIVA08G03440 I 0.883
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.882
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.882
GSMUA_AchrUn_randomG04060_001 Musa acuminata GSMUA_AchrUn_randomG04060_001 I 0.882
SapurV1A.0093s0260 Salix purpurea SapurV1A.0093s0260 I 0.881
PRUPE_ppa017765mg Prunus persica PRUPE_ppa017765mg I 0.880
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.880
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.879
Cagra.27691s0001 Capsella grandiflora Cagra.27691s0001 I 0.879
Thhalv10012158m.g Eutrema salsugineum Thhalv10012158m.g I 0.879
Si036303m.g Setaria italica Si036303m.g I 0.879
Eucgr.J00531 Eucalyptus grandis Eucgr.J00531 I 0.878
GSMUA_Achr11G16860_001 Musa acuminata GSMUA_Achr11G16860_001 I 0.878
anac067 Arabidopsis thaliana AT4G01520 I 0.877
GSMUA_Achr6G31580_001 Musa acuminata GSMUA_Achr6G31580_001 I 0.877
GSMUA_Achr9G10040_001 Musa acuminata GSMUA_Achr9G10040_001 I 0.876
LPERR08G03510 Leersia perrieri LPERR08G03510 I 0.875
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.874
Pavir.Fb00405 Panicum virgatum Pavir.Fb00405 I 0.874
Sb02g026510 Sorghum bicolor Sb02g026510 I 0.874
MTR_8g023930 Medicago truncatula MTR_8g023930 I 0.873
Pm019659 Prunus mume Pm019659 I 0.872
Bra036326 Brassica rapa Bra036326 I 0.872
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.871
GLYMA12G31211 Glycine max GLYMA12G31211 I 0.871